Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 Z98044.1-201ENST00000632503 1764 ntBASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 WIZP1-201ENST00000531444 2299 ntBASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH3KBP1Q96B97 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 AC010240.3-201ENST00000607688 395 ntBASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 AC069148.1-201ENST00000608741 768 ntBASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 AL157888.1-201ENST00000631930 593 ntBASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 AC009113.1-201ENST00000570267 2443 ntBASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH3KBP1Q96B97 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 AL645929.1-201ENST00000420084 975 ntBASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 AC092597.1-201ENST00000487352 616 ntBASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SH3KBP1Q96B97 ANO7L1-203ENST00000602586 1720 ntBASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 AL136038.4-201ENST00000603606 1261 ntBASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms