Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 AC106820.2-201ENST00000563775 3264 ntBASIC12.32□□□□□ -0.44
COPS9Q8WXC6 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 AL356441.2-201ENST00000443009 864 ntBASIC12.32□□□□□ -0.44
COPS9Q8WXC6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 CYP2T3P-201ENST00000601990 817 ntBASIC12.31□□□□□ -0.44
COPS9Q8WXC6 AC010536.3-201ENST00000620306 533 ntBASIC12.31□□□□□ -0.44
COPS9Q8WXC6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 MIR6084-201ENST00000622012 110 ntBASIC12.31□□□□□ -0.44
COPS9Q8WXC6 AL035685.1-201ENST00000636663 812 ntBASIC12.31□□□□□ -0.44
COPS9Q8WXC6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 GAS2L1P1-201ENST00000420145 1480 ntBASIC12.31□□□□□ -0.44
COPS9Q8WXC6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.31□□□□□ -0.44
COPS9Q8WXC6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
COPS9Q8WXC6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms