Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 MYLKP1-201ENST00000509077 1580 ntBASIC31.11■■■□□ 2.57
TRIM41Q8WV44 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 ANO7L1-203ENST00000602586 1720 ntBASIC31.11■■■□□ 2.57
TRIM41Q8WV44 AC104109.2-201ENST00000602919 1418 ntBASIC31.11■■■□□ 2.57
TRIM41Q8WV44 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TRIM41Q8WV44 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
TRIM41Q8WV44 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRIM41Q8WV44 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRIM41Q8WV44 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC31.1■■■□□ 2.57
TRIM41Q8WV44 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC31.1■■■□□ 2.57
TRIM41Q8WV44 PRKN-208ENST00000610470 531 ntTSL 2 BASIC31.1■■■□□ 2.57
TRIM41Q8WV44 PRKN-209ENST00000612485 225 ntTSL 5 BASIC31.1■■■□□ 2.57
TRIM41Q8WV44 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRIM41Q8WV44 AP000974.1-201ENST00000623909 2387 ntBASIC31.1■■■□□ 2.57
TRIM41Q8WV44 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRIM41Q8WV44 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRIM41Q8WV44 CROCCP3-202ENST00000420820 1947 ntBASIC31.1■■■□□ 2.57
TRIM41Q8WV44 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRIM41Q8WV44 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRIM41Q8WV44 AC112777.1-201ENST00000540175 1423 ntBASIC31.09■■■□□ 2.57
TRIM41Q8WV44 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRIM41Q8WV44 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRIM41Q8WV44 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRIM41Q8WV44 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRIM41Q8WV44 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TRIM41Q8WV44 AC211486.1-202ENST00000416371 468 ntBASIC31.09■■■□□ 2.57
TRIM41Q8WV44 AC211476.1-201ENST00000503899 468 ntBASIC31.09■■■□□ 2.57
TRIM41Q8WV44 NAA38-203ENST00000575071 553 ntTSL 2 BASIC31.09■■■□□ 2.57
TRIM41Q8WV44 AC116407.3-201ENST00000623905 1129 ntBASIC31.09■■■□□ 2.57
TRIM41Q8WV44 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRIM41Q8WV44 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
TRIM41Q8WV44 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRIM41Q8WV44 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TRIM41Q8WV44 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
TRIM41Q8WV44 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 AL031598.1-201ENST00000561511 1773 ntBASIC31.08■■■□□ 2.57
TRIM41Q8WV44 AC063926.2-201ENST00000623766 1308 ntBASIC31.08■■■□□ 2.57
TRIM41Q8WV44 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 GREM1-201ENST00000560677 623 ntTSL 4 BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
TRIM41Q8WV44 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
TRIM41Q8WV44 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 COA5-202ENST00000409997 557 ntTSL 4 BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC31.07■■■□□ 2.56
TRIM41Q8WV44 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 AC138761.1-201ENST00000584393 385 ntBASIC31.06■■■□□ 2.56
TRIM41Q8WV44 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 AC005082.1-201ENST00000413042 2259 ntBASIC31.06■■■□□ 2.56
TRIM41Q8WV44 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC31.06■■■□□ 2.56
TRIM41Q8WV44 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
TRIM41Q8WV44 SDHAP2-201ENST00000455183 2001 ntBASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms