Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 AC135776.1-201ENST00000319817 2481 ntBASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 RCN1P1-201ENST00000400413 996 ntBASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 AC006011.2-201ENST00000621313 1158 ntBASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.38■□□□□ 0.37
SRFBP1Q8NEF9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 AL024508.2-201ENST00000607749 1894 ntBASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 TMPOP1-202ENST00000424642 1267 ntBASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 AL136038.4-201ENST00000603606 1261 ntBASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 KRT89P-201ENST00000620027 1478 ntBASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRFBP1Q8NEF9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 NEFHP1-201ENST00000412845 2629 ntBASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.36■□□□□ 0.37
SRFBP1Q8NEF9 AL354751.1-201ENST00000412768 1863 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms