Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TTC39CQ8N584 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TTC39CQ8N584 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.34■□□□□ 0.69
TTC39CQ8N584 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TTC39CQ8N584 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.34■□□□□ 0.69
TTC39CQ8N584 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TTC39CQ8N584 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TTC39CQ8N584 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TTC39CQ8N584 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TTC39CQ8N584 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TTC39CQ8N584 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TTC39CQ8N584 LINC00167-201ENST00000530583 1419 ntBASIC19.34■□□□□ 0.69
TTC39CQ8N584 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC39CQ8N584 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.33■□□□□ 0.69
TTC39CQ8N584 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC39CQ8N584 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC39CQ8N584 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TTC39CQ8N584 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TTC39CQ8N584 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC39CQ8N584 AC020763.4-201ENST00000623414 4170 ntBASIC19.33■□□□□ 0.69
TTC39CQ8N584 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.33■□□□□ 0.69
TTC39CQ8N584 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC39CQ8N584 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
TTC39CQ8N584 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC39CQ8N584 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
TTC39CQ8N584 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC39CQ8N584 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TTC39CQ8N584 AC005332.1-201ENST00000577698 1310 ntBASIC19.33■□□□□ 0.69
TTC39CQ8N584 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TTC39CQ8N584 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TTC39CQ8N584 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TTC39CQ8N584 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TTC39CQ8N584 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TTC39CQ8N584 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TTC39CQ8N584 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.33■□□□□ 0.68
TTC39CQ8N584 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.33■□□□□ 0.68
TTC39CQ8N584 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.33■□□□□ 0.68
TTC39CQ8N584 AC011498.5-201ENST00000592027 486 ntBASIC19.33■□□□□ 0.68
TTC39CQ8N584 FLJ13224-201ENST00000313737 1514 ntBASIC19.33■□□□□ 0.68
TTC39CQ8N584 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.33■□□□□ 0.68
TTC39CQ8N584 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TTC39CQ8N584 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TTC39CQ8N584 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TTC39CQ8N584 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TTC39CQ8N584 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TTC39CQ8N584 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TTC39CQ8N584 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TTC39CQ8N584 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.32■□□□□ 0.68
TTC39CQ8N584 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
TTC39CQ8N584 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.32■□□□□ 0.68
TTC39CQ8N584 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.32■□□□□ 0.68
TTC39CQ8N584 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TTC39CQ8N584 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.32■□□□□ 0.68
TTC39CQ8N584 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TTC39CQ8N584 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TTC39CQ8N584 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.32■□□□□ 0.68
TTC39CQ8N584 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TTC39CQ8N584 AC004263.2-201ENST00000617183 678 ntBASIC19.32■□□□□ 0.68
TTC39CQ8N584 AC116407.4-201ENST00000623319 1061 ntBASIC19.32■□□□□ 0.68
TTC39CQ8N584 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 AL354751.1-201ENST00000412768 1863 ntBASIC19.32■□□□□ 0.68
TTC39CQ8N584 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.32■□□□□ 0.68
TTC39CQ8N584 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39CQ8N584 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
TTC39CQ8N584 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39CQ8N584 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39CQ8N584 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39CQ8N584 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TTC39CQ8N584 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39CQ8N584 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.31■□□□□ 0.68
TTC39CQ8N584 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39CQ8N584 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TTC39CQ8N584 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
TTC39CQ8N584 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39CQ8N584 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39CQ8N584 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TTC39CQ8N584 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39CQ8N584 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39CQ8N584 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39CQ8N584 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.31■□□□□ 0.68
TTC39CQ8N584 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms