Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.04■□□□□ 0.8
NME8Q8N427 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
NME8Q8N427 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 AC079781.3-201ENST00000449110 356 ntBASIC20.03■□□□□ 0.8
NME8Q8N427 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.03■□□□□ 0.8
NME8Q8N427 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.03■□□□□ 0.8
NME8Q8N427 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NME8Q8N427 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NME8Q8N427 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.02■□□□□ 0.8
NME8Q8N427 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NME8Q8N427 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NME8Q8N427 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NME8Q8N427 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NME8Q8N427 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NME8Q8N427 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NME8Q8N427 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NME8Q8N427 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NME8Q8N427 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.02■□□□□ 0.8
NME8Q8N427 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.02■□□□□ 0.8
NME8Q8N427 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NME8Q8N427 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.02■□□□□ 0.8
NME8Q8N427 AC009154.2-201ENST00000621177 724 ntBASIC20.02■□□□□ 0.8
NME8Q8N427 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.02■□□□□ 0.8
NME8Q8N427 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NME8Q8N427 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.02■□□□□ 0.8
NME8Q8N427 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.02■□□□□ 0.8
NME8Q8N427 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NME8Q8N427 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.02■□□□□ 0.8
NME8Q8N427 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.02■□□□□ 0.8
NME8Q8N427 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
NME8Q8N427 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
NME8Q8N427 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
NME8Q8N427 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NME8Q8N427 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NME8Q8N427 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NME8Q8N427 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NME8Q8N427 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
NME8Q8N427 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 NUS1P2-201ENST00000417358 873 ntBASIC20.01■□□□□ 0.79
NME8Q8N427 AC009078.2-202ENST00000463353 338 ntBASIC20.01■□□□□ 0.79
NME8Q8N427 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.01■□□□□ 0.79
NME8Q8N427 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.01■□□□□ 0.79
NME8Q8N427 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.01■□□□□ 0.79
NME8Q8N427 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 MIR5100-201ENST00000579544 119 ntBASIC20.01■□□□□ 0.79
NME8Q8N427 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.01■□□□□ 0.79
NME8Q8N427 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.01■□□□□ 0.79
NME8Q8N427 REXO1L6P-202ENST00000619970 1078 ntBASIC20.01■□□□□ 0.79
NME8Q8N427 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.01■□□□□ 0.79
NME8Q8N427 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.01■□□□□ 0.79
NME8Q8N427 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.01■□□□□ 0.79
NME8Q8N427 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NME8Q8N427 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20■□□□□ 0.79
NME8Q8N427 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NME8Q8N427 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NME8Q8N427 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NME8Q8N427 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NME8Q8N427 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20■□□□□ 0.79
NME8Q8N427 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NME8Q8N427 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NME8Q8N427 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20■□□□□ 0.79
NME8Q8N427 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20■□□□□ 0.79
NME8Q8N427 SAPCD2P3-201ENST00000455031 850 ntBASIC20■□□□□ 0.79
NME8Q8N427 AC106795.1-205ENST00000512851 1056 ntBASIC20■□□□□ 0.79
NME8Q8N427 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20■□□□□ 0.79
NME8Q8N427 AL662844.1-201ENST00000546340 181 ntBASIC20■□□□□ 0.79
NME8Q8N427 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20■□□□□ 0.79
NME8Q8N427 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20■□□□□ 0.79
NME8Q8N427 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20■□□□□ 0.79
NME8Q8N427 BNIP3P18-201ENST00000593976 575 ntBASIC20■□□□□ 0.79
NME8Q8N427 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NME8Q8N427 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20■□□□□ 0.79
NME8Q8N427 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NME8Q8N427 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NME8Q8N427 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20■□□□□ 0.79
NME8Q8N427 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms