Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
LTBP4Q8N2S1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC25.15■■□□□ 1.62
LTBP4Q8N2S1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC25.15■■□□□ 1.62
LTBP4Q8N2S1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LTBP4Q8N2S1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LTBP4Q8N2S1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC25.15■■□□□ 1.62
LTBP4Q8N2S1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
LTBP4Q8N2S1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
LTBP4Q8N2S1 AL512356.2-201ENST00000546955 174 ntBASIC25.15■■□□□ 1.62
LTBP4Q8N2S1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
LTBP4Q8N2S1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC25.14■■□□□ 1.62
LTBP4Q8N2S1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC25.14■■□□□ 1.62
LTBP4Q8N2S1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LTBP4Q8N2S1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
LTBP4Q8N2S1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LTBP4Q8N2S1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LTBP4Q8N2S1 NCF1C-201ENST00000438382 1427 ntBASIC25.14■■□□□ 1.61
LTBP4Q8N2S1 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
LTBP4Q8N2S1 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC25.14■■□□□ 1.61
LTBP4Q8N2S1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC25.14■■□□□ 1.61
LTBP4Q8N2S1 AL662799.1-202ENST00000614205 422 ntBASIC25.14■■□□□ 1.61
LTBP4Q8N2S1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
LTBP4Q8N2S1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
LTBP4Q8N2S1 AC020907.5-201ENST00000624372 1936 ntBASIC25.14■■□□□ 1.61
LTBP4Q8N2S1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
LTBP4Q8N2S1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 KRT18P65-201ENST00000439811 1286 ntBASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 AL390754.1-201ENST00000619088 582 ntBASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 FO538757.1-201ENST00000623083 1397 ntBASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
LTBP4Q8N2S1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 AC112698.1-201ENST00000510299 916 ntBASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 Z82202.1-201ENST00000623446 1880 ntBASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 AC027307.3-201ENST00000594262 1100 ntBASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 AP001059.3-201ENST00000619053 235 ntBASIC25.12■■□□□ 1.61
LTBP4Q8N2S1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 AC023141.13-201ENST00000604991 943 ntBASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LTBP4Q8N2S1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 TUBB3P1-201ENST00000405796 1332 ntBASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 AC107890.1-201ENST00000422478 521 ntBASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 SERBP1P5-201ENST00000510079 1181 ntBASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 AC092919.2-201ENST00000623631 1645 ntBASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC25.1■■□□□ 1.61
LTBP4Q8N2S1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LTBP4Q8N2S1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LTBP4Q8N2S1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC25.09■■□□□ 1.61
LTBP4Q8N2S1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LTBP4Q8N2S1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms