Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 AL845331.1-201ENST00000424978 1190 ntBASIC18.89■□□□□ 0.61
SCML4Q8N228 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.89■□□□□ 0.61
SCML4Q8N228 MTCL1P1-201ENST00000446207 792 ntBASIC18.89■□□□□ 0.61
SCML4Q8N228 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.89■□□□□ 0.61
SCML4Q8N228 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.89■□□□□ 0.61
SCML4Q8N228 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.89■□□□□ 0.61
SCML4Q8N228 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
SCML4Q8N228 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.89■□□□□ 0.61
SCML4Q8N228 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
SCML4Q8N228 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SCML4Q8N228 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.89■□□□□ 0.61
SCML4Q8N228 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.89■□□□□ 0.61
SCML4Q8N228 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SCML4Q8N228 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCML4Q8N228 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.89■□□□□ 0.61
SCML4Q8N228 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.89■□□□□ 0.61
SCML4Q8N228 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
SCML4Q8N228 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.88■□□□□ 0.61
SCML4Q8N228 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.88■□□□□ 0.61
SCML4Q8N228 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SCML4Q8N228 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.88■□□□□ 0.61
SCML4Q8N228 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.88■□□□□ 0.61
SCML4Q8N228 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SCML4Q8N228 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.88■□□□□ 0.61
SCML4Q8N228 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SCML4Q8N228 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SCML4Q8N228 AC093458.2-201ENST00000623150 629 ntBASIC18.88■□□□□ 0.61
SCML4Q8N228 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 AC022898.2-201ENST00000616822 1312 ntBASIC18.88■□□□□ 0.61
SCML4Q8N228 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SCML4Q8N228 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SCML4Q8N228 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SCML4Q8N228 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SCML4Q8N228 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCML4Q8N228 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.87■□□□□ 0.61
SCML4Q8N228 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.87■□□□□ 0.61
SCML4Q8N228 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.87■□□□□ 0.61
SCML4Q8N228 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SCML4Q8N228 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.87■□□□□ 0.61
SCML4Q8N228 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.87■□□□□ 0.61
SCML4Q8N228 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.87■□□□□ 0.61
SCML4Q8N228 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.87■□□□□ 0.61
SCML4Q8N228 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.87■□□□□ 0.61
SCML4Q8N228 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
SCML4Q8N228 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.87■□□□□ 0.61
SCML4Q8N228 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.87■□□□□ 0.61
SCML4Q8N228 AC092329.2-201ENST00000598402 547 ntBASIC18.87■□□□□ 0.61
SCML4Q8N228 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.87■□□□□ 0.61
SCML4Q8N228 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
SCML4Q8N228 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCML4Q8N228 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SCML4Q8N228 AC104581.1-202ENST00000635932 2618 ntBASIC18.87■□□□□ 0.61
SCML4Q8N228 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms