Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.61■□□□□ 0.57
SIX5Q8N196 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX5Q8N196 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.61■□□□□ 0.57
SIX5Q8N196 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.61■□□□□ 0.57
SIX5Q8N196 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SIX5Q8N196 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.61■□□□□ 0.57
SIX5Q8N196 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.61■□□□□ 0.57
SIX5Q8N196 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.61■□□□□ 0.57
SIX5Q8N196 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.61■□□□□ 0.57
SIX5Q8N196 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.61■□□□□ 0.57
SIX5Q8N196 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX5Q8N196 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX5Q8N196 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX5Q8N196 AC120498.9-201ENST00000339021 3867 ntBASIC18.61■□□□□ 0.57
SIX5Q8N196 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.61■□□□□ 0.57
SIX5Q8N196 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX5Q8N196 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.61■□□□□ 0.57
SIX5Q8N196 INTS4P1-201ENST00000438455 1935 ntBASIC18.61■□□□□ 0.57
SIX5Q8N196 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIX5Q8N196 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.6■□□□□ 0.57
SIX5Q8N196 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIX5Q8N196 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.6■□□□□ 0.57
SIX5Q8N196 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIX5Q8N196 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.6■□□□□ 0.57
SIX5Q8N196 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIX5Q8N196 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SIX5Q8N196 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SIX5Q8N196 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIX5Q8N196 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIX5Q8N196 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIX5Q8N196 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.6■□□□□ 0.57
SIX5Q8N196 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIX5Q8N196 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.6■□□□□ 0.57
SIX5Q8N196 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.6■□□□□ 0.57
SIX5Q8N196 RNA5SP416-201ENST00000516838 111 ntBASIC18.6■□□□□ 0.57
SIX5Q8N196 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.6■□□□□ 0.57
SIX5Q8N196 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.6■□□□□ 0.57
SIX5Q8N196 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
SIX5Q8N196 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.6■□□□□ 0.57
SIX5Q8N196 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIX5Q8N196 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SIX5Q8N196 IRX1P1-201ENST00000438849 1838 ntBASIC18.6■□□□□ 0.57
SIX5Q8N196 AL157384.1-201ENST00000445995 2473 ntBASIC18.6■□□□□ 0.57
SIX5Q8N196 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.6■□□□□ 0.57
SIX5Q8N196 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.59■□□□□ 0.57
SIX5Q8N196 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.59■□□□□ 0.57
SIX5Q8N196 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.59■□□□□ 0.57
SIX5Q8N196 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.59■□□□□ 0.57
SIX5Q8N196 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.59■□□□□ 0.57
SIX5Q8N196 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.59■□□□□ 0.57
SIX5Q8N196 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.59■□□□□ 0.57
SIX5Q8N196 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.59■□□□□ 0.57
SIX5Q8N196 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 AC068587.9-201ENST00000641814 219 ntBASIC18.59■□□□□ 0.57
SIX5Q8N196 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.59■□□□□ 0.57
SIX5Q8N196 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
SIX5Q8N196 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SIX5Q8N196 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX5Q8N196 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SIX5Q8N196 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.58■□□□□ 0.57
SIX5Q8N196 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.58■□□□□ 0.57
SIX5Q8N196 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIX5Q8N196 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIX5Q8N196 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
SIX5Q8N196 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIX5Q8N196 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SIX5Q8N196 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX5Q8N196 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX5Q8N196 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.58■□□□□ 0.56
SIX5Q8N196 DNAJB3-202ENST00000449667 1266 ntBASIC18.58■□□□□ 0.56
SIX5Q8N196 AC068472.1-201ENST00000474589 881 ntBASIC18.58■□□□□ 0.56
SIX5Q8N196 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
SIX5Q8N196 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.58■□□□□ 0.56
SIX5Q8N196 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX5Q8N196 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SIX5Q8N196 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.58■□□□□ 0.56
SIX5Q8N196 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.58■□□□□ 0.56
SIX5Q8N196 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.58■□□□□ 0.56
SIX5Q8N196 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX5Q8N196 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SIX5Q8N196 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.58■□□□□ 0.56
SIX5Q8N196 AL356309.3-201ENST00000624132 1934 ntBASIC18.58■□□□□ 0.56
SIX5Q8N196 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SIX5Q8N196 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.58■□□□□ 0.56
SIX5Q8N196 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.58■□□□□ 0.56
SIX5Q8N196 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
SIX5Q8N196 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX5Q8N196 AC112907.3-201ENST00000577781 2400 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms