Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.06□□□□□ -0.48
SCXQ7RTU7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 AL671277.2-201ENST00000458060 996 ntBASIC12.06□□□□□ -0.48
SCXQ7RTU7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 AL138781.2-201ENST00000617896 1843 ntBASIC12.06□□□□□ -0.48
SCXQ7RTU7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SCXQ7RTU7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.06□□□□□ -0.48
SCXQ7RTU7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 AC104417.2-201ENST00000562989 1793 ntBASIC12.05□□□□□ -0.48
SCXQ7RTU7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 AC009947.2-201ENST00000444014 672 ntBASIC12.05□□□□□ -0.48
SCXQ7RTU7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 AC008622.2-201ENST00000617006 1229 ntBASIC12.05□□□□□ -0.48
SCXQ7RTU7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 AP000550.4-202ENST00000639755 178 ntBASIC12.05□□□□□ -0.48
SCXQ7RTU7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 ZNF815P-204ENST00000434898 1737 ntBASIC12.05□□□□□ -0.48
SCXQ7RTU7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.05□□□□□ -0.48
SCXQ7RTU7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SCXQ7RTU7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms