Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC149Q6ZUS6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC149Q6ZUS6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC149Q6ZUS6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC149Q6ZUS6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC149Q6ZUS6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC149Q6ZUS6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC149Q6ZUS6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CCDC149Q6ZUS6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC149Q6ZUS6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC149Q6ZUS6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
CCDC149Q6ZUS6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 BX842568.4-201ENST00000421222 227 ntBASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 AC139887.3-201ENST00000568585 713 ntBASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 AC005336.2-201ENST00000593183 939 ntBASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 MIR7706-201ENST00000613747 67 ntBASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 TP73-AS1-210ENST00000637775 1455 ntBASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC149Q6ZUS6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC149Q6ZUS6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CCDC149Q6ZUS6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC149Q6ZUS6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC149Q6ZUS6 ZNF259P1-201ENST00000407656 1365 ntBASIC19.08■□□□□ 0.65
CCDC149Q6ZUS6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC149Q6ZUS6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC149Q6ZUS6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CCDC149Q6ZUS6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC149Q6ZUS6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CCDC149Q6ZUS6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 MTCL1P1-201ENST00000446207 792 ntBASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC149Q6ZUS6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 FAM220CP-201ENST00000395253 831 ntBASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 RCN1P2-201ENST00000398357 915 ntBASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC149Q6ZUS6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms