Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 AC138932.1-201ENST00000534164 6830 ntBASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 FAM8A6P-201ENST00000407496 1135 ntBASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 KRT18P38-201ENST00000449496 1282 ntBASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 HYMAI.1-201ENST00000620949 238 ntBASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.68■□□□□ 0.1
COLCA1Q6ZS62 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 RN7SL850P-201ENST00000579959 291 ntBASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.67■□□□□ 0.1
COLCA1Q6ZS62 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 HBZP1-201ENST00000354915 429 ntBASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 MIR662-201ENST00000384847 95 ntBASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 AC092597.1-201ENST00000487352 616 ntBASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 KRT18P55-202ENST00000578578 1546 ntBASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLCA1Q6ZS62 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms