Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
DCLRE1AQ6PJP8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.42■□□□□ 0.7
DCLRE1AQ6PJP8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 GMCL1P1-201ENST00000463439 1581 ntBASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 MTCL1P1-201ENST00000446207 792 ntBASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 AC023511.2-201ENST00000618803 211 ntBASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DCLRE1AQ6PJP8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 NUS1P2-201ENST00000417358 873 ntBASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 KRT18P65-201ENST00000439811 1286 ntBASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 BNIP3P18-201ENST00000593976 575 ntBASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DCLRE1AQ6PJP8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
DCLRE1AQ6PJP8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.39■□□□□ 0.7
DCLRE1AQ6PJP8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.39■□□□□ 0.7
DCLRE1AQ6PJP8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.39■□□□□ 0.7
DCLRE1AQ6PJP8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 AL022342.1-201ENST00000400363 863 ntBASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 MIR5100-201ENST00000579544 119 ntBASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 AC104692.2-201ENST00000603054 253 ntBASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 AC006538.3-201ENST00000612495 578 ntBASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 AL031008.1-201ENST00000619963 541 ntBASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 AC120498.9-201ENST00000339021 3867 ntBASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DCLRE1AQ6PJP8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DCLRE1AQ6PJP8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DCLRE1AQ6PJP8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms