Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC62Q6P9F0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 AL662844.1-201ENST00000546340 181 ntBASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 AC114341.1-201ENST00000618070 349 ntBASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC62Q6P9F0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 AL591684.3-201ENST00000605187 298 ntBASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 AC009154.2-201ENST00000621177 724 ntBASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 TP73-AS1-207ENST00000624167 988 ntBASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 HLA-A-201ENST00000376802 1334 ntBASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC62Q6P9F0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 AC096582.2-201ENST00000510860 516 ntBASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC62Q6P9F0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 RCN1P2-201ENST00000398357 915 ntBASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 MTCL1P1-201ENST00000446207 792 ntBASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 RNA5SP419-201ENST00000515908 135 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms