Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF549Q6P9A3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF549Q6P9A3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
ZNF549Q6P9A3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZNF549Q6P9A3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF549Q6P9A3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 AP000997.3-201ENST00000623333 2250 ntBASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 SLC25A3P1-201ENST00000443844 931 ntBASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 AC012306.2-201ENST00000609350 630 ntBASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 AC141257.4-201ENST00000634557 245 ntBASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 AC136944.6-201ENST00000634818 245 ntBASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 AC093010.1-201ENST00000473625 1624 ntBASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF549Q6P9A3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 LETM1P2-201ENST00000597330 2178 ntBASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 FLJ13224-201ENST00000313737 1514 ntBASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF549Q6P9A3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 AC010203.1-204ENST00000548782 407 ntBASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 AC009065.1-201ENST00000564055 1225 ntBASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 MIR3917-201ENST00000580971 93 ntBASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF549Q6P9A3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 PCDHB18P-201ENST00000524813 2368 ntBASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms