Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 AC036111.1-201ENST00000533973 1582 ntBASIC16.6■□□□□ 0.25
NIPAL3Q6P499 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 HMGA1P5-201ENST00000412453 271 ntBASIC16.6■□□□□ 0.25
NIPAL3Q6P499 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 MIR3180-5-201ENST00000583743 153 ntBASIC16.6■□□□□ 0.25
NIPAL3Q6P499 FAM87A-204ENST00000613235 858 ntBASIC16.6■□□□□ 0.25
NIPAL3Q6P499 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.6■□□□□ 0.25
NIPAL3Q6P499 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NIPAL3Q6P499 FZD10-202ENST00000539839 3282 ntBASIC16.58■□□□□ 0.25
NIPAL3Q6P499 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
NIPAL3Q6P499 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.58■□□□□ 0.25
NIPAL3Q6P499 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NIPAL3Q6P499 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NIPAL3Q6P499 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
NIPAL3Q6P499 AC211429.1-201ENST00000415277 523 ntBASIC16.58■□□□□ 0.24
NIPAL3Q6P499 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 CR769767.2-201ENST00000622735 460 ntBASIC16.58■□□□□ 0.24
NIPAL3Q6P499 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 FLJ13224-201ENST00000313737 1514 ntBASIC16.58■□□□□ 0.24
NIPAL3Q6P499 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
NIPAL3Q6P499 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms