Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.45■□□□□ 0.22
RTL6Q6ICC9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.45■□□□□ 0.22
RTL6Q6ICC9 KRT8P50-201ENST00000562022 1438 ntBASIC16.45■□□□□ 0.22
RTL6Q6ICC9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 TOB2P1-201ENST00000469761 992 ntBASIC16.44■□□□□ 0.22
RTL6Q6ICC9 AP000867.3-201ENST00000524675 377 ntBASIC16.44■□□□□ 0.22
RTL6Q6ICC9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RTL6Q6ICC9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 IGHGP-201ENST00000390555 1178 ntBASIC16.43■□□□□ 0.22
RTL6Q6ICC9 AL845331.1-201ENST00000424978 1190 ntBASIC16.43■□□□□ 0.22
RTL6Q6ICC9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 AC111152.3-201ENST00000569699 673 ntBASIC16.43■□□□□ 0.22
RTL6Q6ICC9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 GPR32P1-201ENST00000601788 811 ntBASIC16.43■□□□□ 0.22
RTL6Q6ICC9 AC024563.2-201ENST00000603282 481 ntBASIC16.43■□□□□ 0.22
RTL6Q6ICC9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.43■□□□□ 0.22
RTL6Q6ICC9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
RTL6Q6ICC9 AC246785.2-201ENST00000432512 513 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms