Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 MMP23A-201ENST00000234610 1017 ntBASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 TSPY15P-201ENST00000457163 923 ntBASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.84■□□□□ 0.13
ATPAF1Q5TC12 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATPAF1Q5TC12 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.83■□□□□ 0.13
ATPAF1Q5TC12 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATPAF1Q5TC12 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATPAF1Q5TC12 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATPAF1Q5TC12 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ATPAF1Q5TC12 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATPAF1Q5TC12 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.83■□□□□ 0.13
ATPAF1Q5TC12 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.83■□□□□ 0.13
ATPAF1Q5TC12 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ATPAF1Q5TC12 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 MIR1238-201ENST00000408483 83 ntBASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 SLC25A1P2-201ENST00000430693 912 ntBASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ATPAF1Q5TC12 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 BX088651.1-201ENST00000540551 451 ntBASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 C2orf69P3-201ENST00000565542 1120 ntBASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 AC135776.1-201ENST00000319817 2481 ntBASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATPAF1Q5TC12 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATPAF1Q5TC12 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
ATPAF1Q5TC12 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATPAF1Q5TC12 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATPAF1Q5TC12 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATPAF1Q5TC12 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms