Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 AP002982.1-201ENST00000492365 877 ntBASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 AC142086.2-201ENST00000569753 217 ntBASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 AC233263.1-201ENST00000578059 224 ntBASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 AC011298.2-201ENST00000617989 482 ntBASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 AD000864.1-201ENST00000624076 2295 ntBASIC12.48□□□□□ -0.41
LINC00242Q5T6M2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 KSR1P1-201ENST00000446298 240 ntBASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 RPS2P4-201ENST00000476944 856 ntBASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 AL353708.3-201ENST00000610272 989 ntBASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 AL023806.1-201ENST00000603994 1649 ntBASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 AC099343.3-201ENST00000605834 2503 ntBASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00242Q5T6M2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00242Q5T6M2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms