Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 AP003041.3-201ENST00000527151 707 ntBASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 AC233702.5-201ENST00000584107 538 ntBASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 PP12613-201ENST00000424958 2230 ntBASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIF1Q5T3J3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 SLC25A1P2-201ENST00000430693 912 ntBASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 AC104390.1-201ENST00000555663 520 ntBASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 AC108860.2-201ENST00000562760 2183 ntBASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 AL353719.1-201ENST00000566847 864 ntBASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 AP001412.1-201ENST00000608405 714 ntBASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIF1Q5T3J3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 TSPY17P-201ENST00000450329 467 ntBASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 FAM201B-201ENST00000458407 597 ntBASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 DUTP2-201ENST00000519164 463 ntBASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 AL049637.2-201ENST00000641778 930 ntBASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
LRIF1Q5T3J3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIF1Q5T3J3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms