Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 AC009065.1-201ENST00000564055 1225 ntBASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 AC140113.3-201ENST00000605663 199 ntBASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 AC012313.10-201ENST00000623509 926 ntBASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 AL023973.1-201ENST00000624619 620 ntBASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 AL162741.1-201ENST00000565563 1558 ntBASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HERC4Q5GLZ8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 FDX1P1-201ENST00000449115 551 ntBASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 GCSHP2-201ENST00000560971 527 ntBASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 AL390961.4-201ENST00000623958 2535 ntBASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 GMCL1P1-201ENST00000463439 1581 ntBASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
HERC4Q5GLZ8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 AL354751.1-201ENST00000412768 1863 ntBASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 PVRIG2P-201ENST00000435460 978 ntBASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 BCL2-203ENST00000589955 5011 ntBASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 AC093677.2-201ENST00000600169 1863 ntBASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HERC4Q5GLZ8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 ABALON-201ENST00000629058 1903 ntBASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 MIR3917-201ENST00000580971 93 ntBASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 AC006538.3-201ENST00000612495 578 ntBASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HERC4Q5GLZ8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms