Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RUNDC3AQ59EK9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RUNDC3AQ59EK9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RUNDC3AQ59EK9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.23■□□□□ 0.35
RUNDC3AQ59EK9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.23■□□□□ 0.35
RUNDC3AQ59EK9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RUNDC3AQ59EK9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RUNDC3AQ59EK9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RUNDC3AQ59EK9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RUNDC3AQ59EK9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 HOXB1-202ENST00000577092 1414 ntBASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 LINC01126-201ENST00000623515 1646 ntBASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 AC097488.1-201ENST00000507834 756 ntBASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 AL359736.2-201ENST00000621992 437 ntBASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 AC108860.2-201ENST00000562760 2183 ntBASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.22■□□□□ 0.35
RUNDC3AQ59EK9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 PP12613-201ENST00000424958 2230 ntBASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.21■□□□□ 0.35
RUNDC3AQ59EK9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RUNDC3AQ59EK9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
RUNDC3AQ59EK9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 NUDT16P1-203ENST00000513809 620 ntBASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 MIR4651-201ENST00000582622 73 ntBASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RUNDC3AQ59EK9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms