Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.7
CTC1Q2NKJ3 AC005332.8-201ENST00000622750 2735 ntBASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 MIR940-201ENST00000401276 94 ntBASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 HMGN1P19-201ENST00000436976 333 ntBASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 FAM215A-202ENST00000632077 792 ntBASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTC1Q2NKJ3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 AC034236.2-201ENST00000606662 1610 ntBASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 AC132008.2-207ENST00000454517 770 ntBASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 AC073648.2-201ENST00000510116 352 ntBASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 AC114341.1-201ENST00000618070 349 ntBASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTC1Q2NKJ3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 AL355877.3-201ENST00000622820 899 ntBASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 AC006333.2-201ENST00000607957 2099 ntBASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CTC1Q2NKJ3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms