Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 HLA-A-201ENST00000376802 1334 ntBASIC19.5■□□□□ 0.71
VCPP55072 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.49■□□□□ 0.71
VCPP55072 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.49■□□□□ 0.71
VCPP55072 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
VCPP55072 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.49■□□□□ 0.71
VCPP55072 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.49■□□□□ 0.71
VCPP55072 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.49■□□□□ 0.71
VCPP55072 TSPY12P-201ENST00000421279 868 ntBASIC19.49■□□□□ 0.71
VCPP55072 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.49■□□□□ 0.71
VCPP55072 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 FOSL1P1-201ENST00000511041 816 ntBASIC19.49■□□□□ 0.71
VCPP55072 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
VCPP55072 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.49■□□□□ 0.71
VCPP55072 AF228730.7-201ENST00000641842 219 ntBASIC19.49■□□□□ 0.71
VCPP55072 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.49■□□□□ 0.71
VCPP55072 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.49■□□□□ 0.71
VCPP55072 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
VCPP55072 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
VCPP55072 HEIH-201ENST00000623091 1652 ntBASIC19.49■□□□□ 0.71
VCPP55072 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCPP55072 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
VCPP55072 AC036111.1-201ENST00000533973 1582 ntBASIC19.49■□□□□ 0.71
VCPP55072 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
VCPP55072 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
VCPP55072 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.48■□□□□ 0.71
VCPP55072 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
VCPP55072 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.48■□□□□ 0.71
VCPP55072 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 MIR574-201ENST00000385209 96 ntBASIC19.48■□□□□ 0.71
VCPP55072 KRT18P31-201ENST00000506277 1292 ntBASIC19.48■□□□□ 0.71
VCPP55072 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.48■□□□□ 0.71
VCPP55072 AP000867.3-201ENST00000524675 377 ntBASIC19.48■□□□□ 0.71
VCPP55072 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.48■□□□□ 0.71
VCPP55072 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 LINC01711-201ENST00000598340 967 ntBASIC19.48■□□□□ 0.71
VCPP55072 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.48■□□□□ 0.71
VCPP55072 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
VCPP55072 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
VCPP55072 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCPP55072 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.47■□□□□ 0.71
VCPP55072 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VCPP55072 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VCPP55072 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCPP55072 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCPP55072 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.47■□□□□ 0.71
VCPP55072 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCPP55072 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCPP55072 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VCPP55072 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VCPP55072 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VCPP55072 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VCPP55072 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCPP55072 AL023284.2-201ENST00000405850 579 ntBASIC19.47■□□□□ 0.71
VCPP55072 MIR1233-2-201ENST00000408138 82 ntBASIC19.47■□□□□ 0.71
VCPP55072 MIR1233-1-201ENST00000408722 82 ntBASIC19.47■□□□□ 0.71
VCPP55072 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.47■□□□□ 0.71
VCPP55072 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.47■□□□□ 0.71
VCPP55072 KRT8P26-201ENST00000534154 1276 ntBASIC19.47■□□□□ 0.71
VCPP55072 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCPP55072 AC026471.1-201ENST00000564629 3026 ntBASIC19.47■□□□□ 0.71
VCPP55072 AL354751.1-201ENST00000412768 1863 ntBASIC19.47■□□□□ 0.71
VCPP55072 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VCPP55072 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.47■□□□□ 0.71
VCPP55072 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
VCPP55072 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.47■□□□□ 0.71
VCPP55072 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCPP55072 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCPP55072 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VCPP55072 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
VCPP55072 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VCPP55072 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms