Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC4P55056 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC4P55056 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
APOC4P55056 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
APOC4P55056 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
APOC4P55056 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC4P55056 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.35□□□□□ -0.27
APOC4P55056 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
APOC4P55056 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.35□□□□□ -0.27
APOC4P55056 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.35□□□□□ -0.27
APOC4P55056 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.35□□□□□ -0.27
APOC4P55056 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
APOC4P55056 AC104819.1-201ENST00000504587 486 ntBASIC13.35□□□□□ -0.27
APOC4P55056 AP000867.3-201ENST00000524675 377 ntBASIC13.35□□□□□ -0.27
APOC4P55056 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.35□□□□□ -0.27
APOC4P55056 AC012615.1-201ENST00000565797 1299 ntBASIC13.35□□□□□ -0.27
APOC4P55056 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.35□□□□□ -0.27
APOC4P55056 AC011840.4-201ENST00000578471 627 ntBASIC13.35□□□□□ -0.27
APOC4P55056 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
APOC4P55056 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
APOC4P55056 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.35□□□□□ -0.27
APOC4P55056 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOC4P55056 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
APOC4P55056 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC4P55056 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOC4P55056 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.35□□□□□ -0.27
APOC4P55056 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.34□□□□□ -0.27
APOC4P55056 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.34□□□□□ -0.27
APOC4P55056 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
APOC4P55056 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
APOC4P55056 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
APOC4P55056 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
APOC4P55056 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.34□□□□□ -0.27
APOC4P55056 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 TSPY12P-201ENST00000421279 868 ntBASIC13.34□□□□□ -0.27
APOC4P55056 AL450487.1-201ENST00000426799 995 ntBASIC13.34□□□□□ -0.27
APOC4P55056 AP002383.4-201ENST00000442518 975 ntBASIC13.34□□□□□ -0.27
APOC4P55056 TOB2P1-201ENST00000469761 992 ntBASIC13.34□□□□□ -0.27
APOC4P55056 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.34□□□□□ -0.27
APOC4P55056 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.34□□□□□ -0.27
APOC4P55056 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.34□□□□□ -0.27
APOC4P55056 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.34□□□□□ -0.27
APOC4P55056 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.34□□□□□ -0.27
APOC4P55056 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 AL592071.1-201ENST00000611956 408 ntBASIC13.34□□□□□ -0.27
APOC4P55056 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
APOC4P55056 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.34□□□□□ -0.27
APOC4P55056 AC124864.1-201ENST00000623408 392 ntBASIC13.34□□□□□ -0.27
APOC4P55056 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.34□□□□□ -0.27
APOC4P55056 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 SDHAP2-201ENST00000455183 2001 ntBASIC13.34□□□□□ -0.27
APOC4P55056 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC4P55056 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.27
APOC4P55056 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOC4P55056 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APOC4P55056 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms