Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPAP53621 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.8■□□□□ 0.6
COPAP53621 BICD1-207ENST00000551848 1962 ntBASIC18.8■□□□□ 0.6
COPAP53621 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.8■□□□□ 0.6
COPAP53621 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPAP53621 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPAP53621 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.8■□□□□ 0.6
COPAP53621 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.8■□□□□ 0.6
COPAP53621 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPAP53621 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COPAP53621 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COPAP53621 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPAP53621 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPAP53621 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPAP53621 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPAP53621 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COPAP53621 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.79■□□□□ 0.6
COPAP53621 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COPAP53621 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPAP53621 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
COPAP53621 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.79■□□□□ 0.6
COPAP53621 BX276092.5-203ENST00000456199 560 ntBASIC18.79■□□□□ 0.6
COPAP53621 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.79■□□□□ 0.6
COPAP53621 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.79■□□□□ 0.6
COPAP53621 MIR3180-1-201ENST00000580374 94 ntBASIC18.79■□□□□ 0.6
COPAP53621 MIR3180-3-201ENST00000584616 94 ntBASIC18.79■□□□□ 0.6
COPAP53621 AC010240.3-201ENST00000607688 395 ntBASIC18.79■□□□□ 0.6
COPAP53621 AL121672.3-201ENST00000608644 468 ntBASIC18.79■□□□□ 0.6
COPAP53621 AC093525.10-201ENST00000625130 1569 ntBASIC18.79■□□□□ 0.6
COPAP53621 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPAP53621 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COPAP53621 AL354751.1-201ENST00000412768 1863 ntBASIC18.79■□□□□ 0.6
COPAP53621 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COPAP53621 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COPAP53621 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COPAP53621 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.79■□□□□ 0.6
COPAP53621 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPAP53621 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPAP53621 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COPAP53621 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.79■□□□□ 0.6
COPAP53621 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.79■□□□□ 0.6
COPAP53621 FP475955.4-201ENST00000623131 1990 ntBASIC18.79■□□□□ 0.6
COPAP53621 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.79■□□□□ 0.6
COPAP53621 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COPAP53621 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.78■□□□□ 0.6
COPAP53621 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
COPAP53621 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
COPAP53621 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COPAP53621 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.78■□□□□ 0.6
COPAP53621 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COPAP53621 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.78■□□□□ 0.6
COPAP53621 AP002383.4-201ENST00000442518 975 ntBASIC18.78■□□□□ 0.6
COPAP53621 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
COPAP53621 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.78■□□□□ 0.6
COPAP53621 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPAP53621 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.77■□□□□ 0.6
COPAP53621 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPAP53621 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.77■□□□□ 0.6
COPAP53621 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPAP53621 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPAP53621 NOC2LP1-202ENST00000452600 2235 ntBASIC18.77■□□□□ 0.6
COPAP53621 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.77■□□□□ 0.6
COPAP53621 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPAP53621 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPAP53621 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COPAP53621 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPAP53621 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COPAP53621 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
COPAP53621 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.77■□□□□ 0.6
COPAP53621 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.77■□□□□ 0.6
COPAP53621 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.77■□□□□ 0.6
COPAP53621 AC092329.2-201ENST00000598402 547 ntBASIC18.77■□□□□ 0.6
COPAP53621 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.77■□□□□ 0.6
COPAP53621 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.77■□□□□ 0.6
COPAP53621 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
COPAP53621 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPAP53621 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COPAP53621 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COPAP53621 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.77■□□□□ 0.6
COPAP53621 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPAP53621 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPAP53621 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPAP53621 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPAP53621 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.77■□□□□ 0.59
COPAP53621 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COPAP53621 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms