Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRCA2P51587 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRCA2P51587 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.29■□□□□ 0.84
BRCA2P51587 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCA2P51587 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCA2P51587 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.29■□□□□ 0.84
BRCA2P51587 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.29■□□□□ 0.84
BRCA2P51587 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCA2P51587 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
BRCA2P51587 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.29■□□□□ 0.84
BRCA2P51587 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.29■□□□□ 0.84
BRCA2P51587 AC073592.4-201ENST00000623827 446 ntBASIC20.29■□□□□ 0.84
BRCA2P51587 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.29■□□□□ 0.84
BRCA2P51587 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCA2P51587 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRCA2P51587 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCA2P51587 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRCA2P51587 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRCA2P51587 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.29■□□□□ 0.84
BRCA2P51587 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRCA2P51587 AC105339.3-201ENST00000560043 636 ntBASIC20.29■□□□□ 0.84
BRCA2P51587 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.29■□□□□ 0.84
BRCA2P51587 Z92544.3-201ENST00000624747 417 ntBASIC20.29■□□□□ 0.84
BRCA2P51587 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
BRCA2P51587 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.29■□□□□ 0.84
BRCA2P51587 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.29■□□□□ 0.84
BRCA2P51587 AL163051.1-201ENST00000569214 1512 ntBASIC20.29■□□□□ 0.84
BRCA2P51587 SDHAP2-201ENST00000455183 2001 ntBASIC20.29■□□□□ 0.84
BRCA2P51587 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRCA2P51587 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCA2P51587 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.28■□□□□ 0.84
BRCA2P51587 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCA2P51587 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.28■□□□□ 0.84
BRCA2P51587 MKNK2P1-201ENST00000437526 628 ntBASIC20.28■□□□□ 0.84
BRCA2P51587 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.28■□□□□ 0.84
BRCA2P51587 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.28■□□□□ 0.84
BRCA2P51587 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCA2P51587 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.28■□□□□ 0.84
BRCA2P51587 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCA2P51587 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCA2P51587 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.28■□□□□ 0.84
BRCA2P51587 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
BRCA2P51587 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCA2P51587 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.28■□□□□ 0.84
BRCA2P51587 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRCA2P51587 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.28■□□□□ 0.84
BRCA2P51587 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRCA2P51587 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRCA2P51587 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.28■□□□□ 0.84
BRCA2P51587 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRCA2P51587 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
BRCA2P51587 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.27■□□□□ 0.84
BRCA2P51587 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.27■□□□□ 0.84
BRCA2P51587 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRCA2P51587 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
BRCA2P51587 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.27■□□□□ 0.84
BRCA2P51587 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRCA2P51587 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCA2P51587 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCA2P51587 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRCA2P51587 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.27■□□□□ 0.84
BRCA2P51587 AC097374.2-201ENST00000618617 1306 ntBASIC20.27■□□□□ 0.84
BRCA2P51587 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCA2P51587 AC148477.5-201ENST00000625164 1645 ntBASIC20.27■□□□□ 0.84
BRCA2P51587 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.27■□□□□ 0.84
BRCA2P51587 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.27■□□□□ 0.84
BRCA2P51587 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCA2P51587 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.27■□□□□ 0.84
BRCA2P51587 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.27■□□□□ 0.84
BRCA2P51587 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.27■□□□□ 0.84
BRCA2P51587 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCA2P51587 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRCA2P51587 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
BRCA2P51587 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BRCA2P51587 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BRCA2P51587 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BRCA2P51587 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.27■□□□□ 0.83
BRCA2P51587 AJ011932.1-201ENST00000621707 465 ntBASIC20.27■□□□□ 0.83
BRCA2P51587 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BRCA2P51587 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
BRCA2P51587 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BRCA2P51587 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.26■□□□□ 0.83
BRCA2P51587 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRCA2P51587 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.26■□□□□ 0.83
BRCA2P51587 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRCA2P51587 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRCA2P51587 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
BRCA2P51587 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BRCA2P51587 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRCA2P51587 PMPCAP1-201ENST00000508114 1576 ntBASIC20.26■□□□□ 0.83
BRCA2P51587 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRCA2P51587 GPR89P-201ENST00000407924 1495 ntBASIC20.26■□□□□ 0.83
BRCA2P51587 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.26■□□□□ 0.83
BRCA2P51587 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.26■□□□□ 0.83
BRCA2P51587 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BRCA2P51587 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRCA2P51587 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.26■□□□□ 0.83
BRCA2P51587 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.26■□□□□ 0.83
BRCA2P51587 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.26■□□□□ 0.83
BRCA2P51587 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms