Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CASP4P49662 NOC2LP2-201ENST00000407594 1944 ntBASIC19.88■□□□□ 0.77
CASP4P49662 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.88■□□□□ 0.77
CASP4P49662 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.88■□□□□ 0.77
CASP4P49662 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CASP4P49662 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 AL391807.1-203ENST00000604392 2365 ntBASIC19.87■□□□□ 0.77
CASP4P49662 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CASP4P49662 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CASP4P49662 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.87■□□□□ 0.77
CASP4P49662 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.87■□□□□ 0.77
CASP4P49662 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
CASP4P49662 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.87■□□□□ 0.77
CASP4P49662 AC063952.2-201ENST00000498792 1227 ntBASIC19.87■□□□□ 0.77
CASP4P49662 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.87■□□□□ 0.77
CASP4P49662 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CASP4P49662 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.87■□□□□ 0.77
CASP4P49662 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.87■□□□□ 0.77
CASP4P49662 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CASP4P49662 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.87■□□□□ 0.77
CASP4P49662 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP4P49662 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASP4P49662 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.86■□□□□ 0.77
CASP4P49662 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASP4P49662 AC067852.2-201ENST00000590513 2313 ntBASIC19.86■□□□□ 0.77
CASP4P49662 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CASP4P49662 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CASP4P49662 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.86■□□□□ 0.77
CASP4P49662 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.86■□□□□ 0.77
CASP4P49662 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CASP4P49662 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.86■□□□□ 0.77
CASP4P49662 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CASP4P49662 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.86■□□□□ 0.77
CASP4P49662 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CASP4P49662 AL136038.4-201ENST00000603606 1261 ntBASIC19.86■□□□□ 0.77
CASP4P49662 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.86■□□□□ 0.77
CASP4P49662 AC008764.6-201ENST00000595909 2069 ntBASIC19.86■□□□□ 0.77
CASP4P49662 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASP4P49662 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASP4P49662 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CASP4P49662 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASP4P49662 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CASP4P49662 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.85■□□□□ 0.77
CASP4P49662 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CASP4P49662 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.85■□□□□ 0.77
CASP4P49662 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 AC005332.8-201ENST00000622750 2735 ntBASIC19.85■□□□□ 0.77
CASP4P49662 AC132938.6-201ENST00000623828 1655 ntBASIC19.85■□□□□ 0.77
CASP4P49662 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CASP4P49662 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.85■□□□□ 0.77
CASP4P49662 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CASP4P49662 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.85■□□□□ 0.77
CASP4P49662 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.85■□□□□ 0.77
CASP4P49662 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.85■□□□□ 0.77
CASP4P49662 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CASP4P49662 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.85■□□□□ 0.77
CASP4P49662 AC022616.7-201ENST00000525383 220 ntBASIC19.85■□□□□ 0.77
CASP4P49662 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.85■□□□□ 0.77
CASP4P49662 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.85■□□□□ 0.77
CASP4P49662 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.85■□□□□ 0.77
CASP4P49662 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CASP4P49662 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CASP4P49662 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.85■□□□□ 0.77
CASP4P49662 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.85■□□□□ 0.77
CASP4P49662 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP4P49662 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CASP4P49662 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASP4P49662 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASP4P49662 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms