Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.04■□□□□ 0.16
CX3CR1P49238 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CX3CR1P49238 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CX3CR1P49238 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CX3CR1P49238 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CX3CR1P49238 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.04■□□□□ 0.16
CX3CR1P49238 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.04■□□□□ 0.16
CX3CR1P49238 FZD10-202ENST00000539839 3282 ntBASIC16.04■□□□□ 0.16
CX3CR1P49238 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CX3CR1P49238 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CX3CR1P49238 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CX3CR1P49238 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CX3CR1P49238 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CX3CR1P49238 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.03■□□□□ 0.16
CX3CR1P49238 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CX3CR1P49238 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.03■□□□□ 0.16
CX3CR1P49238 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.03■□□□□ 0.16
CX3CR1P49238 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CX3CR1P49238 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.03■□□□□ 0.16
CX3CR1P49238 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CX3CR1P49238 AC007663.1-201ENST00000438948 1240 ntBASIC16.03■□□□□ 0.16
CX3CR1P49238 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.03■□□□□ 0.16
CX3CR1P49238 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.03■□□□□ 0.16
CX3CR1P49238 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.03■□□□□ 0.16
CX3CR1P49238 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.03■□□□□ 0.16
CX3CR1P49238 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
CX3CR1P49238 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.03■□□□□ 0.16
CX3CR1P49238 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.03■□□□□ 0.16
CX3CR1P49238 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.03■□□□□ 0.16
CX3CR1P49238 AC138028.4-201ENST00000564984 1845 ntBASIC16.03■□□□□ 0.16
CX3CR1P49238 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.03■□□□□ 0.16
CX3CR1P49238 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.03■□□□□ 0.16
CX3CR1P49238 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CX3CR1P49238 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CR1P49238 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CX3CR1P49238 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CR1P49238 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.02■□□□□ 0.16
CX3CR1P49238 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
CX3CR1P49238 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CR1P49238 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CR1P49238 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CR1P49238 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CX3CR1P49238 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.02■□□□□ 0.16
CX3CR1P49238 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.02■□□□□ 0.16
CX3CR1P49238 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.02■□□□□ 0.16
CX3CR1P49238 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CX3CR1P49238 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.02■□□□□ 0.16
CX3CR1P49238 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.02■□□□□ 0.16
CX3CR1P49238 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.02■□□□□ 0.16
CX3CR1P49238 MIR4497-201ENST00000583208 89 ntBASIC16.02■□□□□ 0.16
CX3CR1P49238 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CR1P49238 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CX3CR1P49238 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CX3CR1P49238 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CX3CR1P49238 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CX3CR1P49238 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CX3CR1P49238 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.02■□□□□ 0.15
CX3CR1P49238 SDHAP2-201ENST00000455183 2001 ntBASIC16.02■□□□□ 0.15
CX3CR1P49238 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CX3CR1P49238 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CX3CR1P49238 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CX3CR1P49238 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CX3CR1P49238 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.02■□□□□ 0.15
CX3CR1P49238 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CX3CR1P49238 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CX3CR1P49238 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 AC008764.6-201ENST00000595909 2069 ntBASIC16.01■□□□□ 0.15
CX3CR1P49238 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CX3CR1P49238 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CX3CR1P49238 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.01■□□□□ 0.15
CX3CR1P49238 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms