Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MTHFRP42898 AP001269.4-201ENST00000609611 512 ntBASIC19.03■□□□□ 0.64
MTHFRP42898 FAM197Y3-203ENST00000618346 717 ntBASIC19.03■□□□□ 0.64
MTHFRP42898 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.03■□□□□ 0.64
MTHFRP42898 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.03■□□□□ 0.64
MTHFRP42898 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.03■□□□□ 0.64
MTHFRP42898 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.03■□□□□ 0.64
MTHFRP42898 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MTHFRP42898 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.03■□□□□ 0.64
MTHFRP42898 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.03■□□□□ 0.64
MTHFRP42898 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MTHFRP42898 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MTHFRP42898 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MTHFRP42898 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
MTHFRP42898 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MTHFRP42898 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MTHFRP42898 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.02■□□□□ 0.64
MTHFRP42898 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MTHFRP42898 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MTHFRP42898 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MTHFRP42898 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.02■□□□□ 0.64
MTHFRP42898 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MTHFRP42898 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
MTHFRP42898 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.02■□□□□ 0.64
MTHFRP42898 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.02■□□□□ 0.64
MTHFRP42898 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MTHFRP42898 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MTHFRP42898 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MTHFRP42898 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.02■□□□□ 0.64
MTHFRP42898 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.02■□□□□ 0.64
MTHFRP42898 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.02■□□□□ 0.64
MTHFRP42898 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MTHFRP42898 PGAM5P1-201ENST00000518923 814 ntBASIC19.02■□□□□ 0.64
MTHFRP42898 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.02■□□□□ 0.64
MTHFRP42898 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.02■□□□□ 0.64
MTHFRP42898 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.02■□□□□ 0.64
MTHFRP42898 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
MTHFRP42898 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MTHFRP42898 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MTHFRP42898 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MTHFRP42898 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MTHFRP42898 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
MTHFRP42898 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MTHFRP42898 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MTHFRP42898 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MTHFRP42898 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MTHFRP42898 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.01■□□□□ 0.63
MTHFRP42898 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MTHFRP42898 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MTHFRP42898 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MTHFRP42898 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.01■□□□□ 0.63
MTHFRP42898 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MTHFRP42898 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MTHFRP42898 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MTHFRP42898 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MTHFRP42898 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.01■□□□□ 0.63
MTHFRP42898 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.01■□□□□ 0.63
MTHFRP42898 MIR149-201ENST00000384879 89 ntBASIC19.01■□□□□ 0.63
MTHFRP42898 AL591424.1-201ENST00000442569 1213 ntBASIC19.01■□□□□ 0.63
MTHFRP42898 AC068472.1-201ENST00000474589 881 ntBASIC19.01■□□□□ 0.63
MTHFRP42898 IGHV3-22-201ENST00000520721 359 ntBASIC19.01■□□□□ 0.63
MTHFRP42898 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.01■□□□□ 0.63
MTHFRP42898 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.01■□□□□ 0.63
MTHFRP42898 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MTHFRP42898 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.01■□□□□ 0.63
MTHFRP42898 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MTHFRP42898 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.01■□□□□ 0.63
MTHFRP42898 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
MTHFRP42898 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MTHFRP42898 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MTHFRP42898 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MTHFRP42898 HEIH-201ENST00000623091 1652 ntBASIC19.01■□□□□ 0.63
MTHFRP42898 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.01■□□□□ 0.63
MTHFRP42898 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.01■□□□□ 0.63
MTHFRP42898 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MTHFRP42898 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MTHFRP42898 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MTHFRP42898 AC104109.2-201ENST00000602919 1418 ntBASIC19■□□□□ 0.63
MTHFRP42898 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19■□□□□ 0.63
MTHFRP42898 AC141586.3-201ENST00000562166 1838 ntBASIC19■□□□□ 0.63
MTHFRP42898 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MTHFRP42898 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MTHFRP42898 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19■□□□□ 0.63
MTHFRP42898 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19■□□□□ 0.63
MTHFRP42898 MED15P5-201ENST00000423150 992 ntBASIC19■□□□□ 0.63
MTHFRP42898 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19■□□□□ 0.63
MTHFRP42898 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19■□□□□ 0.63
MTHFRP42898 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19■□□□□ 0.63
MTHFRP42898 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19■□□□□ 0.63
MTHFRP42898 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19■□□□□ 0.63
MTHFRP42898 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19■□□□□ 0.63
MTHFRP42898 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19■□□□□ 0.63
MTHFRP42898 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19■□□□□ 0.63
MTHFRP42898 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19■□□□□ 0.63
MTHFRP42898 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MTHFRP42898 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19■□□□□ 0.63
MTHFRP42898 INTS4P1-201ENST00000438455 1935 ntBASIC19■□□□□ 0.63
MTHFRP42898 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MTHFRP42898 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19■□□□□ 0.63
MTHFRP42898 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms