Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL15A1P39059 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
COL15A1P39059 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL15A1P39059 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
COL15A1P39059 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
COL15A1P39059 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL15A1P39059 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.01■■□□□ 1.27
COL15A1P39059 RPS2P1-201ENST00000434010 821 ntBASIC23.01■■□□□ 1.27
COL15A1P39059 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC23.01■■□□□ 1.27
COL15A1P39059 ABCD1P5-201ENST00000445663 754 ntBASIC23.01■■□□□ 1.27
COL15A1P39059 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC23.01■■□□□ 1.27
COL15A1P39059 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL15A1P39059 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC23.01■■□□□ 1.27
COL15A1P39059 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC23.01■■□□□ 1.27
COL15A1P39059 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL15A1P39059 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
COL15A1P39059 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC23.01■■□□□ 1.27
COL15A1P39059 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL15A1P39059 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.01■■□□□ 1.27
COL15A1P39059 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC23■■□□□ 1.27
COL15A1P39059 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
COL15A1P39059 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL15A1P39059 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL15A1P39059 LINC00602-201ENST00000629776 2065 ntBASIC23■■□□□ 1.27
COL15A1P39059 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
COL15A1P39059 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
COL15A1P39059 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL15A1P39059 AC104109.2-201ENST00000602919 1418 ntBASIC23■■□□□ 1.27
COL15A1P39059 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL15A1P39059 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL15A1P39059 RPS2P28-201ENST00000314255 741 ntBASIC23■■□□□ 1.27
COL15A1P39059 FUOM-202ENST00000368551 628 ntTSL 3 BASIC23■■□□□ 1.27
COL15A1P39059 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC23■■□□□ 1.27
COL15A1P39059 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL15A1P39059 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23■■□□□ 1.27
COL15A1P39059 CD63-204ENST00000546939 779 ntTSL 3 BASIC23■■□□□ 1.27
COL15A1P39059 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC23■■□□□ 1.27
COL15A1P39059 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
COL15A1P39059 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23■■□□□ 1.27
COL15A1P39059 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
COL15A1P39059 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23■■□□□ 1.27
COL15A1P39059 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL15A1P39059 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL15A1P39059 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23■■□□□ 1.27
COL15A1P39059 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL15A1P39059 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.99■■□□□ 1.27
COL15A1P39059 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
COL15A1P39059 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.99■■□□□ 1.27
COL15A1P39059 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
COL15A1P39059 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.99■■□□□ 1.27
COL15A1P39059 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
COL15A1P39059 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 AC012640.2-201ENST00000561606 901 ntBASIC22.99■■□□□ 1.27
COL15A1P39059 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC22.99■■□□□ 1.27
COL15A1P39059 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 PNMT-203ENST00000581428 677 ntTSL 2 BASIC22.99■■□□□ 1.27
COL15A1P39059 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC22.99■■□□□ 1.27
COL15A1P39059 AC025062.2-201ENST00000605477 670 ntBASIC22.99■■□□□ 1.27
COL15A1P39059 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.99■■□□□ 1.27
COL15A1P39059 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL15A1P39059 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.99■■□□□ 1.27
COL15A1P39059 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.99■■□□□ 1.27
COL15A1P39059 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC22.98■■□□□ 1.27
COL15A1P39059 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL15A1P39059 AL499627.1-201ENST00000569373 2188 ntBASIC22.98■■□□□ 1.27
COL15A1P39059 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL15A1P39059 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL15A1P39059 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL15A1P39059 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL15A1P39059 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.98■■□□□ 1.27
COL15A1P39059 AC098831.1-202ENST00000438821 336 ntBASIC22.98■■□□□ 1.27
COL15A1P39059 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL15A1P39059 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.98■■□□□ 1.27
COL15A1P39059 AC140113.2-201ENST00000604370 208 ntBASIC22.98■■□□□ 1.27
COL15A1P39059 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
COL15A1P39059 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL15A1P39059 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL15A1P39059 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL15A1P39059 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL15A1P39059 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL15A1P39059 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL15A1P39059 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL15A1P39059 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL15A1P39059 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
COL15A1P39059 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL15A1P39059 FAM220CP-201ENST00000395253 831 ntBASIC22.97■■□□□ 1.27
COL15A1P39059 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
COL15A1P39059 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL15A1P39059 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
COL15A1P39059 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms