Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RXRBP28702 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RXRBP28702 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RXRBP28702 VMA21-202ENST00000370361 693 ntTSL 5 BASIC23.73■■□□□ 1.39
RXRBP28702 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC23.73■■□□□ 1.39
RXRBP28702 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RXRBP28702 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RXRBP28702 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC23.73■■□□□ 1.39
RXRBP28702 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC23.73■■□□□ 1.39
RXRBP28702 AC007064.4-201ENST00000637740 555 ntBASIC23.73■■□□□ 1.39
RXRBP28702 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RXRBP28702 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.73■■□□□ 1.39
RXRBP28702 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC23.73■■□□□ 1.39
RXRBP28702 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RXRBP28702 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC23.73■■□□□ 1.39
RXRBP28702 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RXRBP28702 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RXRBP28702 Z82202.1-201ENST00000623446 1880 ntBASIC23.73■■□□□ 1.39
RXRBP28702 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.72■■□□□ 1.39
RXRBP28702 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.72■■□□□ 1.39
RXRBP28702 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
RXRBP28702 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RXRBP28702 MIR149-201ENST00000384879 89 ntBASIC23.72■■□□□ 1.39
RXRBP28702 AL627223.1-201ENST00000416693 442 ntBASIC23.72■■□□□ 1.39
RXRBP28702 SLC25A6P5-201ENST00000435663 894 ntBASIC23.72■■□□□ 1.39
RXRBP28702 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC23.72■■□□□ 1.39
RXRBP28702 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC23.72■■□□□ 1.39
RXRBP28702 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RXRBP28702 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
RXRBP28702 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC23.72■■□□□ 1.39
RXRBP28702 AC023141.13-201ENST00000604991 943 ntBASIC23.72■■□□□ 1.39
RXRBP28702 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RXRBP28702 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RXRBP28702 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RXRBP28702 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RXRBP28702 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
RXRBP28702 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RXRBP28702 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RXRBP28702 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RXRBP28702 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RXRBP28702 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RXRBP28702 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RXRBP28702 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RXRBP28702 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RXRBP28702 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
RXRBP28702 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RXRBP28702 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC23.71■■□□□ 1.39
RXRBP28702 COX5BP8-201ENST00000416911 349 ntBASIC23.71■■□□□ 1.39
RXRBP28702 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
RXRBP28702 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC23.71■■□□□ 1.39
RXRBP28702 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RXRBP28702 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.7■■□□□ 1.39
RXRBP28702 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RXRBP28702 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
RXRBP28702 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
RXRBP28702 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RXRBP28702 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.7■■□□□ 1.38
RXRBP28702 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RXRBP28702 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23.7■■□□□ 1.38
RXRBP28702 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.7■■□□□ 1.38
RXRBP28702 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RXRBP28702 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC23.7■■□□□ 1.38
RXRBP28702 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.7■■□□□ 1.38
RXRBP28702 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
RXRBP28702 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC23.7■■□□□ 1.38
RXRBP28702 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC23.7■■□□□ 1.38
RXRBP28702 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
RXRBP28702 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RXRBP28702 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
RXRBP28702 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RXRBP28702 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RXRBP28702 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RXRBP28702 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RXRBP28702 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RXRBP28702 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RXRBP28702 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.7■■□□□ 1.38
RXRBP28702 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC23.69■■□□□ 1.38
RXRBP28702 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC23.69■■□□□ 1.38
RXRBP28702 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.69■■□□□ 1.38
RXRBP28702 BSG-215ENST00000618006 1329 ntTSL 2 BASIC23.69■■□□□ 1.38
RXRBP28702 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
RXRBP28702 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RXRBP28702 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC23.69■■□□□ 1.38
RXRBP28702 CIPC-205ENST00000555437 566 ntTSL 3 BASIC23.69■■□□□ 1.38
RXRBP28702 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC23.69■■□□□ 1.38
RXRBP28702 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC23.69■■□□□ 1.38
RXRBP28702 AD001527.2-201ENST00000622994 785 ntBASIC23.69■■□□□ 1.38
RXRBP28702 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC23.69■■□□□ 1.38
RXRBP28702 LINC00602-201ENST00000629776 2065 ntBASIC23.69■■□□□ 1.38
RXRBP28702 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.69■■□□□ 1.38
RXRBP28702 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
RXRBP28702 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RXRBP28702 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.69■■□□□ 1.38
RXRBP28702 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RXRBP28702 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RXRBP28702 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RXRBP28702 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RXRBP28702 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC23.68■■□□□ 1.38
RXRBP28702 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RXRBP28702 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms