Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.69■□□□□ 0.1
CD40P25942 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.69■□□□□ 0.1
CD40P25942 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.69■□□□□ 0.1
CD40P25942 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.69■□□□□ 0.1
CD40P25942 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.69■□□□□ 0.1
CD40P25942 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CD40P25942 AL121894.2-201ENST00000602977 491 ntBASIC15.69■□□□□ 0.1
CD40P25942 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.69■□□□□ 0.1
CD40P25942 GMCL1P1-201ENST00000463439 1581 ntBASIC15.69■□□□□ 0.1
CD40P25942 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD40P25942 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.68■□□□□ 0.1
CD40P25942 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.68■□□□□ 0.1
CD40P25942 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.68■□□□□ 0.1
CD40P25942 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CD40P25942 TPM4P1-201ENST00000436100 807 ntBASIC15.68■□□□□ 0.1
CD40P25942 FOSL1P1-201ENST00000511041 816 ntBASIC15.68■□□□□ 0.1
CD40P25942 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.68■□□□□ 0.1
CD40P25942 AC111152.3-201ENST00000569699 673 ntBASIC15.68■□□□□ 0.1
CD40P25942 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.68■□□□□ 0.1
CD40P25942 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.68■□□□□ 0.1
CD40P25942 AL121772.3-201ENST00000610840 674 ntBASIC15.68■□□□□ 0.1
CD40P25942 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.68■□□□□ 0.1
CD40P25942 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD40P25942 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CD40P25942 LINC00602-201ENST00000629776 2065 ntBASIC15.67■□□□□ 0.1
CD40P25942 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD40P25942 AC090340.1-201ENST00000620778 4980 ntBASIC15.67■□□□□ 0.1
CD40P25942 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CD40P25942 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.67■□□□□ 0.1
CD40P25942 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.67■□□□□ 0.1
CD40P25942 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CD40P25942 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD40P25942 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.67■□□□□ 0.1
CD40P25942 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD40P25942 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD40P25942 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CD40P25942 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD40P25942 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD40P25942 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD40P25942 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD40P25942 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.67■□□□□ 0.1
CD40P25942 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CD40P25942 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CD40P25942 TSPY19P-201ENST00000418461 509 ntBASIC15.67■□□□□ 0.1
CD40P25942 IGHV3-47-201ENST00000425060 335 ntBASIC15.67■□□□□ 0.1
CD40P25942 TSPY18P-201ENST00000441642 509 ntBASIC15.67■□□□□ 0.1
CD40P25942 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.67■□□□□ 0.1
CD40P25942 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.67■□□□□ 0.1
CD40P25942 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD40P25942 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.67■□□□□ 0.1
CD40P25942 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.67■□□□□ 0.1
CD40P25942 AC099336.1-202ENST00000602961 463 ntBASIC15.67■□□□□ 0.1
CD40P25942 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.67■□□□□ 0.1
CD40P25942 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CD40P25942 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.67■□□□□ 0.1
CD40P25942 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD40P25942 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD40P25942 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CD40P25942 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD40P25942 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD40P25942 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD40P25942 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.66■□□□□ 0.1
CD40P25942 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CD40P25942 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD40P25942 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD40P25942 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.66■□□□□ 0.1
CD40P25942 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.66■□□□□ 0.1
CD40P25942 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD40P25942 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD40P25942 AL845331.1-201ENST00000424978 1190 ntBASIC15.66■□□□□ 0.1
CD40P25942 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CD40P25942 AC091304.2-201ENST00000564639 760 ntBASIC15.66■□□□□ 0.1
CD40P25942 AP005901.3-202ENST00000581653 237 ntBASIC15.66■□□□□ 0.1
CD40P25942 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.66■□□□□ 0.1
CD40P25942 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.66■□□□□ 0.1
CD40P25942 AC138894.3-201ENST00000603787 634 ntBASIC15.66■□□□□ 0.1
CD40P25942 AL353801.3-201ENST00000609898 542 ntBASIC15.66■□□□□ 0.1
CD40P25942 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD40P25942 AC009154.2-201ENST00000621177 724 ntBASIC15.66■□□□□ 0.1
CD40P25942 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms