Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RAB4AP20338 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RAB4AP20338 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB4AP20338 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RAB4AP20338 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB4AP20338 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB4AP20338 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB4AP20338 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB4AP20338 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB4AP20338 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
RAB4AP20338 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB4AP20338 UBALD1-205ENST00000590891 2641 ntBASIC13.98□□□□□ -0.17
RAB4AP20338 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RAB4AP20338 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB4AP20338 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB4AP20338 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB4AP20338 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RAB4AP20338 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 TERF1P5-201ENST00000477545 1207 ntBASIC13.98□□□□□ -0.17
RAB4AP20338 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB4AP20338 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 SUDS3P1-201ENST00000505831 966 ntBASIC13.98□□□□□ -0.17
RAB4AP20338 AC023632.3-201ENST00000521633 145 ntBASIC13.98□□□□□ -0.17
RAB4AP20338 AL162412.1-201ENST00000567129 965 ntBASIC13.98□□□□□ -0.17
RAB4AP20338 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
RAB4AP20338 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB4AP20338 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB4AP20338 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB4AP20338 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RAB4AP20338 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
RAB4AP20338 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB4AP20338 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
RAB4AP20338 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 AC004854.2-201ENST00000608450 1441 ntBASIC13.98□□□□□ -0.17
RAB4AP20338 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB4AP20338 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB4AP20338 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB4AP20338 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RAB4AP20338 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RAB4AP20338 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB4AP20338 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB4AP20338 AC023824.1-201ENST00000562945 2975 ntBASIC13.97□□□□□ -0.17
RAB4AP20338 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.97□□□□□ -0.17
RAB4AP20338 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB4AP20338 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB4AP20338 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.97□□□□□ -0.17
RAB4AP20338 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 UBE2DNL-204ENST00000602536 740 ntBASIC13.97□□□□□ -0.17
RAB4AP20338 AC016405.3-201ENST00000607710 860 ntBASIC13.97□□□□□ -0.17
RAB4AP20338 AC100791.3-201ENST00000617619 330 ntBASIC13.97□□□□□ -0.17
RAB4AP20338 AC105020.6-201ENST00000621523 1217 ntBASIC13.97□□□□□ -0.17
RAB4AP20338 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RAB4AP20338 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB4AP20338 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB4AP20338 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB4AP20338 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms