Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PTPN1P18031 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
PTPN1P18031 AC124864.1-201ENST00000623408 392 ntBASIC19.26■□□□□ 0.67
PTPN1P18031 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN1P18031 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN1P18031 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTPN1P18031 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.25■□□□□ 0.67
PTPN1P18031 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 PHGDH-209ENST00000641074 1780 ntBASIC19.25■□□□□ 0.67
PTPN1P18031 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.25■□□□□ 0.67
PTPN1P18031 TSPY12P-201ENST00000421279 868 ntBASIC19.25■□□□□ 0.67
PTPN1P18031 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN1P18031 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PTPN1P18031 KRT18P56-201ENST00000507275 550 ntBASIC19.25■□□□□ 0.67
PTPN1P18031 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN1P18031 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN1P18031 AL592071.1-201ENST00000611956 408 ntBASIC19.25■□□□□ 0.67
PTPN1P18031 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PTPN1P18031 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PTPN1P18031 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PTPN1P18031 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN1P18031 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN1P18031 LINC00167-201ENST00000530583 1419 ntBASIC19.25■□□□□ 0.67
PTPN1P18031 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
PTPN1P18031 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN1P18031 AC090164.3-201ENST00000610780 2143 ntBASIC19.24■□□□□ 0.67
PTPN1P18031 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTPN1P18031 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN1P18031 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PTPN1P18031 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN1P18031 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
PTPN1P18031 DRAXINP1-201ENST00000437611 948 ntBASIC19.24■□□□□ 0.67
PTPN1P18031 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 TPSP2-201ENST00000561760 610 ntBASIC19.24■□□□□ 0.67
PTPN1P18031 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN1P18031 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN1P18031 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN1P18031 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN1P18031 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN1P18031 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN1P18031 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN1P18031 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PTPN1P18031 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.23■□□□□ 0.67
PTPN1P18031 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN1P18031 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN1P18031 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN1P18031 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.23■□□□□ 0.67
PTPN1P18031 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN1P18031 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.23■□□□□ 0.67
PTPN1P18031 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN1P18031 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN1P18031 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN1P18031 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN1P18031 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN1P18031 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms