Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC6P09630 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC6P09630 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC6P09630 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC6P09630 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HOXC6P09630 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.52■□□□□ 0.88
HOXC6P09630 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.52■□□□□ 0.88
HOXC6P09630 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC6P09630 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.52■□□□□ 0.88
HOXC6P09630 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.52■□□□□ 0.88
HOXC6P09630 AC012640.2-201ENST00000561606 901 ntBASIC20.52■□□□□ 0.88
HOXC6P09630 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXC6P09630 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HOXC6P09630 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.52■□□□□ 0.88
HOXC6P09630 AL139288.1-201ENST00000623748 933 ntBASIC20.52■□□□□ 0.88
HOXC6P09630 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
HOXC6P09630 AL161938.1-201ENST00000569833 2180 ntBASIC20.52■□□□□ 0.88
HOXC6P09630 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
HOXC6P09630 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.52■□□□□ 0.87
HOXC6P09630 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HOXC6P09630 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.52■□□□□ 0.87
HOXC6P09630 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HOXC6P09630 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
HOXC6P09630 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXC6P09630 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.51■□□□□ 0.87
HOXC6P09630 LINC00602-201ENST00000629776 2065 ntBASIC20.51■□□□□ 0.87
HOXC6P09630 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXC6P09630 AC098831.1-202ENST00000438821 336 ntBASIC20.51■□□□□ 0.87
HOXC6P09630 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.51■□□□□ 0.87
HOXC6P09630 OR7E14P-202ENST00000530490 1290 ntBASIC20.51■□□□□ 0.87
HOXC6P09630 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXC6P09630 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXC6P09630 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXC6P09630 AL356488.2-201ENST00000602755 427 ntBASIC20.51■□□□□ 0.87
HOXC6P09630 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HOXC6P09630 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXC6P09630 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
HOXC6P09630 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HOXC6P09630 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXC6P09630 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
HOXC6P09630 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HOXC6P09630 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC6P09630 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC6P09630 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC6P09630 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC6P09630 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC6P09630 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
HOXC6P09630 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXC6P09630 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXC6P09630 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC6P09630 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC6P09630 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXC6P09630 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXC6P09630 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXC6P09630 MED15P5-201ENST00000423150 992 ntBASIC20.5■□□□□ 0.87
HOXC6P09630 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXC6P09630 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.5■□□□□ 0.87
HOXC6P09630 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.5■□□□□ 0.87
HOXC6P09630 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.5■□□□□ 0.87
HOXC6P09630 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXC6P09630 Z83851.2-201ENST00000609564 659 ntBASIC20.5■□□□□ 0.87
HOXC6P09630 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC6P09630 AC008735.5-201ENST00000623544 497 ntBASIC20.5■□□□□ 0.87
HOXC6P09630 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC6P09630 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXC6P09630 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC6P09630 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXC6P09630 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC6P09630 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC6P09630 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXC6P09630 AL049812.1-201ENST00000432563 2267 ntBASIC20.5■□□□□ 0.87
HOXC6P09630 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC6P09630 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HOXC6P09630 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC6P09630 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC6P09630 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC6P09630 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms