Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RETP07949 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.36■□□□□ 0.53
RETP07949 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RETP07949 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.35■□□□□ 0.53
RETP07949 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 AL109659.2-201ENST00000606809 1674 ntBASIC18.35■□□□□ 0.53
RETP07949 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.35■□□□□ 0.53
RETP07949 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.35■□□□□ 0.53
RETP07949 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RETP07949 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.35■□□□□ 0.53
RETP07949 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.35■□□□□ 0.53
RETP07949 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.35■□□□□ 0.53
RETP07949 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.35■□□□□ 0.53
RETP07949 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.35■□□□□ 0.53
RETP07949 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.35■□□□□ 0.53
RETP07949 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.35■□□□□ 0.53
RETP07949 AC024563.2-201ENST00000603282 481 ntBASIC18.35■□□□□ 0.53
RETP07949 AC008608.2-201ENST00000606089 416 ntBASIC18.35■□□□□ 0.53
RETP07949 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RETP07949 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.35■□□□□ 0.53
RETP07949 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RETP07949 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.35■□□□□ 0.53
RETP07949 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RETP07949 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RETP07949 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.35■□□□□ 0.53
RETP07949 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RETP07949 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
RETP07949 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.34■□□□□ 0.53
RETP07949 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RETP07949 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.34■□□□□ 0.53
RETP07949 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.34■□□□□ 0.53
RETP07949 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RETP07949 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RETP07949 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RETP07949 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.34■□□□□ 0.53
RETP07949 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.34■□□□□ 0.53
RETP07949 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RETP07949 AC091607.1-201ENST00000490318 1060 ntBASIC18.34■□□□□ 0.53
RETP07949 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.34■□□□□ 0.53
RETP07949 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.34■□□□□ 0.53
RETP07949 MIR3180-4-201ENST00000582223 153 ntBASIC18.34■□□□□ 0.53
RETP07949 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.34■□□□□ 0.53
RETP07949 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.34■□□□□ 0.53
RETP07949 MIR7706-201ENST00000613747 67 ntBASIC18.34■□□□□ 0.53
RETP07949 AC055717.3-201ENST00000622967 595 ntBASIC18.34■□□□□ 0.53
RETP07949 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RETP07949 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RETP07949 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RETP07949 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RETP07949 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
RETP07949 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RETP07949 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RETP07949 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RETP07949 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RETP07949 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RETP07949 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.33■□□□□ 0.53
RETP07949 AC120498.9-201ENST00000339021 3867 ntBASIC18.33■□□□□ 0.53
RETP07949 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RETP07949 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RETP07949 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RETP07949 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.33■□□□□ 0.53
RETP07949 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
RETP07949 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RETP07949 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.33■□□□□ 0.52
RETP07949 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RETP07949 RPS2P28-201ENST00000314255 741 ntBASIC18.33■□□□□ 0.52
RETP07949 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RETP07949 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RETP07949 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.33■□□□□ 0.52
RETP07949 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.33■□□□□ 0.52
RETP07949 AC098831.1-202ENST00000438821 336 ntBASIC18.33■□□□□ 0.52
RETP07949 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.33■□□□□ 0.52
RETP07949 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RETP07949 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.33■□□□□ 0.52
RETP07949 PGAM5P1-201ENST00000518923 814 ntBASIC18.33■□□□□ 0.52
RETP07949 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.33■□□□□ 0.52
RETP07949 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.33■□□□□ 0.52
RETP07949 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.33■□□□□ 0.52
RETP07949 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RETP07949 AL049840.3-201ENST00000602669 611 ntBASIC18.33■□□□□ 0.52
RETP07949 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms