Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DOAP06340 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DOAP06340 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DOAP06340 AL031598.1-201ENST00000561511 1773 ntBASIC21.43■■□□□ 1.02
HLA-DOAP06340 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.43■■□□□ 1.02
HLA-DOAP06340 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DOAP06340 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.43■■□□□ 1.02
HLA-DOAP06340 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DOAP06340 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.42■■□□□ 1.02
HLA-DOAP06340 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DOAP06340 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DOAP06340 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.42■■□□□ 1.02
HLA-DOAP06340 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DOAP06340 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
HLA-DOAP06340 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DOAP06340 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
HLA-DOAP06340 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DOAP06340 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.42■■□□□ 1.02
HLA-DOAP06340 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.42■■□□□ 1.02
HLA-DOAP06340 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DOAP06340 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.42■■□□□ 1.02
HLA-DOAP06340 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DOAP06340 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DOAP06340 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.42■■□□□ 1.02
HLA-DOAP06340 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.42■■□□□ 1.02
HLA-DOAP06340 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DOAP06340 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DOAP06340 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DOAP06340 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DOAP06340 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DOAP06340 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DOAP06340 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DOAP06340 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
HLA-DOAP06340 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.41■■□□□ 1.02
HLA-DOAP06340 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.41■■□□□ 1.02
HLA-DOAP06340 AC009533.2-201ENST00000543664 586 ntBASIC21.41■■□□□ 1.02
HLA-DOAP06340 AL662844.1-201ENST00000546340 181 ntBASIC21.41■■□□□ 1.02
HLA-DOAP06340 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DOAP06340 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.41■■□□□ 1.02
HLA-DOAP06340 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DOAP06340 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HLA-DOAP06340 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DOAP06340 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.41■■□□□ 1.02
HLA-DOAP06340 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DOAP06340 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DOAP06340 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.41■■□□□ 1.02
HLA-DOAP06340 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
HLA-DOAP06340 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
HLA-DOAP06340 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.4■■□□□ 1.02
HLA-DOAP06340 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
HLA-DOAP06340 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DOAP06340 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DOAP06340 TP73-AS1-210ENST00000637775 1455 ntBASIC21.4■■□□□ 1.02
HLA-DOAP06340 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DOAP06340 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.4■■□□□ 1.02
HLA-DOAP06340 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DOAP06340 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DOAP06340 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DOAP06340 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.4■■□□□ 1.02
HLA-DOAP06340 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DOAP06340 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DOAP06340 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.4■■□□□ 1.02
HLA-DOAP06340 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.4■■□□□ 1.02
HLA-DOAP06340 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.4■■□□□ 1.02
HLA-DOAP06340 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.4■■□□□ 1.02
HLA-DOAP06340 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.4■■□□□ 1.02
HLA-DOAP06340 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DOAP06340 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HLA-DOAP06340 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.39■■□□□ 1.02
HLA-DOAP06340 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
HLA-DOAP06340 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HLA-DOAP06340 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DOAP06340 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.39■■□□□ 1.01
HLA-DOAP06340 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DOAP06340 RCN1P2-201ENST00000398357 915 ntBASIC21.39■■□□□ 1.01
HLA-DOAP06340 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DOAP06340 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DOAP06340 AC106795.1-205ENST00000512851 1056 ntBASIC21.39■■□□□ 1.01
HLA-DOAP06340 AF238378.1-201ENST00000526806 358 ntBASIC21.39■■□□□ 1.01
HLA-DOAP06340 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.39■■□□□ 1.01
HLA-DOAP06340 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.39■■□□□ 1.01
HLA-DOAP06340 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.39■■□□□ 1.01
HLA-DOAP06340 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DOAP06340 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
HLA-DOAP06340 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DOAP06340 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DOAP06340 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DOAP06340 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
HLA-DOAP06340 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DOAP06340 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DOAP06340 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.38■■□□□ 1.01
HLA-DOAP06340 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DOAP06340 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DOAP06340 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DOAP06340 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.38■■□□□ 1.01
HLA-DOAP06340 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.38■■□□□ 1.01
HLA-DOAP06340 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
HLA-DOAP06340 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.38■■□□□ 1.01
HLA-DOAP06340 SLC25A6P4-201ENST00000586535 553 ntBASIC21.38■■□□□ 1.01
HLA-DOAP06340 AL138831.2-201ENST00000606564 490 ntBASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms