Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL160237.2-201ENST00000556165 472 ntBASIC19.92■□□□□ 0.78
VTNP04004 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
VTNP04004 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.92■□□□□ 0.78
VTNP04004 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.92■□□□□ 0.78
VTNP04004 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
VTNP04004 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
VTNP04004 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
VTNP04004 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
VTNP04004 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
VTNP04004 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VTNP04004 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VTNP04004 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.91■□□□□ 0.78
VTNP04004 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VTNP04004 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VTNP04004 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.91■□□□□ 0.78
VTNP04004 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VTNP04004 AL121912.1-201ENST00000603683 238 ntBASIC19.91■□□□□ 0.78
VTNP04004 REXO1L6P-202ENST00000619970 1078 ntBASIC19.91■□□□□ 0.78
VTNP04004 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
VTNP04004 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
VTNP04004 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VTNP04004 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
VTNP04004 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.91■□□□□ 0.78
VTNP04004 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VTNP04004 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VTNP04004 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.9■□□□□ 0.78
VTNP04004 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.9■□□□□ 0.78
VTNP04004 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VTNP04004 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.9■□□□□ 0.78
VTNP04004 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 SAPCD2P3-201ENST00000455031 850 ntBASIC19.9■□□□□ 0.78
VTNP04004 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.9■□□□□ 0.78
VTNP04004 AF238378.1-201ENST00000526806 358 ntBASIC19.9■□□□□ 0.78
VTNP04004 AP002469.2-201ENST00000531724 424 ntBASIC19.9■□□□□ 0.78
VTNP04004 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.9■□□□□ 0.78
VTNP04004 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
VTNP04004 MIR5100-201ENST00000579544 119 ntBASIC19.9■□□□□ 0.78
VTNP04004 AL591684.3-201ENST00000605187 298 ntBASIC19.9■□□□□ 0.78
VTNP04004 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.9■□□□□ 0.78
VTNP04004 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.9■□□□□ 0.78
VTNP04004 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.9■□□□□ 0.78
VTNP04004 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VTNP04004 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
VTNP04004 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.9■□□□□ 0.78
VTNP04004 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.9■□□□□ 0.78
VTNP04004 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.78
VTNP04004 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
VTNP04004 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
VTNP04004 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
VTNP04004 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.89■□□□□ 0.77
VTNP04004 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.89■□□□□ 0.77
VTNP04004 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
VTNP04004 RCN1P2-201ENST00000398357 915 ntBASIC19.89■□□□□ 0.77
VTNP04004 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.89■□□□□ 0.77
VTNP04004 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.89■□□□□ 0.77
VTNP04004 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.89■□□□□ 0.77
VTNP04004 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.89■□□□□ 0.77
VTNP04004 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.89■□□□□ 0.77
VTNP04004 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
VTNP04004 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.89■□□□□ 0.77
VTNP04004 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.89■□□□□ 0.77
VTNP04004 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.89■□□□□ 0.77
VTNP04004 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.89■□□□□ 0.77
VTNP04004 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.89■□□□□ 0.77
VTNP04004 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.89■□□□□ 0.77
VTNP04004 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.89■□□□□ 0.77
VTNP04004 AC114341.1-201ENST00000618070 349 ntBASIC19.89■□□□□ 0.77
VTNP04004 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTNP04004 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.89■□□□□ 0.77
VTNP04004 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VTNP04004 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms