Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLSTN1O94985 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLSTN1O94985 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLSTN1O94985 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLSTN1O94985 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.17■□□□□ 0.82
CLSTN1O94985 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLSTN1O94985 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLSTN1O94985 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
CLSTN1O94985 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLSTN1O94985 AL137013.1-201ENST00000432946 1228 ntBASIC20.17■□□□□ 0.82
CLSTN1O94985 KRT18P57-201ENST00000443599 1254 ntBASIC20.17■□□□□ 0.82
CLSTN1O94985 SLC25A3P1-201ENST00000443844 931 ntBASIC20.17■□□□□ 0.82
CLSTN1O94985 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.17■□□□□ 0.82
CLSTN1O94985 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLSTN1O94985 AC010653.2-201ENST00000623505 997 ntBASIC20.17■□□□□ 0.82
CLSTN1O94985 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.17■□□□□ 0.82
CLSTN1O94985 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLSTN1O94985 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLSTN1O94985 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CLSTN1O94985 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLSTN1O94985 KRT8P32-201ENST00000512863 1461 ntBASIC20.17■□□□□ 0.82
CLSTN1O94985 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.17■□□□□ 0.82
CLSTN1O94985 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLSTN1O94985 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.17■□□□□ 0.82
CLSTN1O94985 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.16■□□□□ 0.82
CLSTN1O94985 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CLSTN1O94985 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CLSTN1O94985 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.16■□□□□ 0.82
CLSTN1O94985 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CLSTN1O94985 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.16■□□□□ 0.82
CLSTN1O94985 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLSTN1O94985 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CLSTN1O94985 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.16■□□□□ 0.82
CLSTN1O94985 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.16■□□□□ 0.82
CLSTN1O94985 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.16■□□□□ 0.82
CLSTN1O94985 MIR3180-5-201ENST00000583743 153 ntBASIC20.16■□□□□ 0.82
CLSTN1O94985 FAM87A-204ENST00000613235 858 ntBASIC20.16■□□□□ 0.82
CLSTN1O94985 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 KRT8P45-201ENST00000414328 1447 ntBASIC20.16■□□□□ 0.82
CLSTN1O94985 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.16■□□□□ 0.82
CLSTN1O94985 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CLSTN1O94985 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLSTN1O94985 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLSTN1O94985 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.15■□□□□ 0.82
CLSTN1O94985 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CLSTN1O94985 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
CLSTN1O94985 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.15■□□□□ 0.82
CLSTN1O94985 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.15■□□□□ 0.82
CLSTN1O94985 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.15■□□□□ 0.82
CLSTN1O94985 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.15■□□□□ 0.82
CLSTN1O94985 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.15■□□□□ 0.82
CLSTN1O94985 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.15■□□□□ 0.82
CLSTN1O94985 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.15■□□□□ 0.82
CLSTN1O94985 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.15■□□□□ 0.82
CLSTN1O94985 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.15■□□□□ 0.82
CLSTN1O94985 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLSTN1O94985 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CLSTN1O94985 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.14■□□□□ 0.82
CLSTN1O94985 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
CLSTN1O94985 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLSTN1O94985 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.82
CLSTN1O94985 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLSTN1O94985 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLSTN1O94985 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLSTN1O94985 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.14■□□□□ 0.81
CLSTN1O94985 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms