Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC8.08□□□□□ -1.12
USH2AO75445 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
USH2AO75445 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
USH2AO75445 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
USH2AO75445 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC8.08□□□□□ -1.12
USH2AO75445 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 GPR53P-205ENST00000457298 1084 ntBASIC8.07□□□□□ -1.12
USH2AO75445 AC010507.1-201ENST00000633895 436 ntBASIC8.07□□□□□ -1.12
USH2AO75445 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
USH2AO75445 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC8.07□□□□□ -1.12
USH2AO75445 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC8.07□□□□□ -1.12
USH2AO75445 IGHV3-71-201ENST00000523324 359 ntBASIC8.07□□□□□ -1.12
USH2AO75445 TMED1-207ENST00000591695 809 ntTSL 5 BASIC8.07□□□□□ -1.12
USH2AO75445 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
USH2AO75445 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC8.07□□□□□ -1.12
USH2AO75445 RPS2P32-201ENST00000439199 892 ntBASIC8.07□□□□□ -1.12
USH2AO75445 CR383656.12-201ENST00000549567 513 ntBASIC8.07□□□□□ -1.12
USH2AO75445 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC8.07□□□□□ -1.12
USH2AO75445 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
USH2AO75445 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC8.07□□□□□ -1.12
USH2AO75445 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 AL137060.1-201ENST00000618151 2648 ntBASIC8.07□□□□□ -1.12
USH2AO75445 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC8.07□□□□□ -1.12
USH2AO75445 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC8.07□□□□□ -1.12
USH2AO75445 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
USH2AO75445 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 SPDYE21P-201ENST00000413323 827 ntBASIC8.07□□□□□ -1.12
USH2AO75445 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC8.07□□□□□ -1.12
USH2AO75445 HLA-DPB2-205ENST00000435074 1188 ntBASIC8.07□□□□□ -1.12
USH2AO75445 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC8.07□□□□□ -1.12
USH2AO75445 AC025678.2-201ENST00000562061 970 ntBASIC8.07□□□□□ -1.12
USH2AO75445 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC8.07□□□□□ -1.12
USH2AO75445 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC8.07□□□□□ -1.12
USH2AO75445 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 MED29-202ENST00000594368 1471 ntTSL 2 BASIC8.07□□□□□ -1.12
USH2AO75445 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC8.07□□□□□ -1.12
USH2AO75445 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
USH2AO75445 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
USH2AO75445 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC8.06□□□□□ -1.12
USH2AO75445 AC004877.2-201ENST00000623941 599 ntBASIC8.06□□□□□ -1.12
USH2AO75445 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 RPL30-202ENST00000396070 440 ntTSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 RN7SL692P-201ENST00000464677 288 ntBASIC8.06□□□□□ -1.12
USH2AO75445 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC8.06□□□□□ -1.12
USH2AO75445 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC8.06□□□□□ -1.12
USH2AO75445 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 AC003101.2-201ENST00000612557 442 ntBASIC8.06□□□□□ -1.12
USH2AO75445 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
USH2AO75445 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC8.06□□□□□ -1.12
USH2AO75445 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC8.06□□□□□ -1.12
USH2AO75445 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC8.06□□□□□ -1.12
USH2AO75445 MIR4751-201ENST00000578027 74 ntBASIC8.06□□□□□ -1.12
USH2AO75445 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC8.06□□□□□ -1.12
USH2AO75445 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
USH2AO75445 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms