Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.49■□□□□ 0.39
CDX4O14627 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.49■□□□□ 0.39
CDX4O14627 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.49■□□□□ 0.39
CDX4O14627 AC112698.1-201ENST00000510299 916 ntBASIC17.49■□□□□ 0.39
CDX4O14627 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.49■□□□□ 0.39
CDX4O14627 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDX4O14627 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CDX4O14627 AP002472.1-201ENST00000577490 586 ntBASIC17.49■□□□□ 0.39
CDX4O14627 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.49■□□□□ 0.39
CDX4O14627 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.49■□□□□ 0.39
CDX4O14627 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX4O14627 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX4O14627 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDX4O14627 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.49■□□□□ 0.39
CDX4O14627 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDX4O14627 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.49■□□□□ 0.39
CDX4O14627 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.49■□□□□ 0.39
CDX4O14627 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX4O14627 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDX4O14627 AL157384.1-201ENST00000445995 2473 ntBASIC17.48■□□□□ 0.39
CDX4O14627 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.48■□□□□ 0.39
CDX4O14627 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.48■□□□□ 0.39
CDX4O14627 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDX4O14627 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDX4O14627 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.48■□□□□ 0.39
CDX4O14627 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX4O14627 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX4O14627 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.48■□□□□ 0.39
CDX4O14627 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.48■□□□□ 0.39
CDX4O14627 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.48■□□□□ 0.39
CDX4O14627 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.48■□□□□ 0.39
CDX4O14627 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX4O14627 AC136632.2-201ENST00000512891 861 ntBASIC17.48■□□□□ 0.39
CDX4O14627 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDX4O14627 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.48■□□□□ 0.39
CDX4O14627 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDX4O14627 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDX4O14627 C20orf181-201ENST00000623918 480 ntBASIC17.48■□□□□ 0.39
CDX4O14627 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX4O14627 AC004817.3-201ENST00000602957 2129 ntBASIC17.48■□□□□ 0.39
CDX4O14627 PMPCAP1-201ENST00000508114 1576 ntBASIC17.48■□□□□ 0.39
CDX4O14627 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX4O14627 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX4O14627 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.48■□□□□ 0.39
CDX4O14627 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDX4O14627 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDX4O14627 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDX4O14627 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDX4O14627 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDX4O14627 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.47■□□□□ 0.39
CDX4O14627 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDX4O14627 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDX4O14627 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.47■□□□□ 0.39
CDX4O14627 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDX4O14627 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDX4O14627 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.47■□□□□ 0.39
CDX4O14627 MIR770-201ENST00000390219 98 ntBASIC17.47■□□□□ 0.39
CDX4O14627 AL035633.1-201ENST00000406139 838 ntBASIC17.47■□□□□ 0.39
CDX4O14627 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.47■□□□□ 0.39
CDX4O14627 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.47■□□□□ 0.39
CDX4O14627 PRYP5-201ENST00000451909 266 ntBASIC17.47■□□□□ 0.39
CDX4O14627 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.47■□□□□ 0.39
CDX4O14627 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.47■□□□□ 0.39
CDX4O14627 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.47■□□□□ 0.39
CDX4O14627 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.47■□□□□ 0.39
CDX4O14627 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.47■□□□□ 0.39
CDX4O14627 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.47■□□□□ 0.39
CDX4O14627 AC073592.4-201ENST00000623827 446 ntBASIC17.47■□□□□ 0.39
CDX4O14627 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.47■□□□□ 0.39
CDX4O14627 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDX4O14627 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDX4O14627 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDX4O14627 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.47■□□□□ 0.39
CDX4O14627 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDX4O14627 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CDX4O14627 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.46■□□□□ 0.39
CDX4O14627 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CDX4O14627 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CDX4O14627 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.46■□□□□ 0.39
CDX4O14627 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 MYLKP1-201ENST00000509077 1580 ntBASIC17.46■□□□□ 0.39
CDX4O14627 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CDX4O14627 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.46■□□□□ 0.39
CDX4O14627 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.46■□□□□ 0.39
CDX4O14627 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.46■□□□□ 0.39
CDX4O14627 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDX4O14627 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CDX4O14627 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDX4O14627 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.46■□□□□ 0.39
CDX4O14627 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms