Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHL1O00533 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHL1O00533 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
CHL1O00533 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHL1O00533 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHL1O00533 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHL1O00533 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CHL1O00533 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CHL1O00533 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC23.35■■□□□ 1.33
CHL1O00533 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC23.35■■□□□ 1.33
CHL1O00533 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CHL1O00533 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.35■■□□□ 1.33
CHL1O00533 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC23.35■■□□□ 1.33
CHL1O00533 VENTXP7-201ENST00000475503 772 ntBASIC23.35■■□□□ 1.33
CHL1O00533 FOSL1P1-201ENST00000511041 816 ntBASIC23.35■■□□□ 1.33
CHL1O00533 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.35■■□□□ 1.33
CHL1O00533 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.35■■□□□ 1.33
CHL1O00533 CCNC-219ENST00000627680 896 ntTSL 5 BASIC23.35■■□□□ 1.33
CHL1O00533 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.35■■□□□ 1.33
CHL1O00533 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.35■■□□□ 1.33
CHL1O00533 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.35■■□□□ 1.33
CHL1O00533 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHL1O00533 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHL1O00533 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHL1O00533 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHL1O00533 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.34■■□□□ 1.33
CHL1O00533 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHL1O00533 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
CHL1O00533 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHL1O00533 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHL1O00533 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CHL1O00533 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHL1O00533 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
CHL1O00533 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC23.34■■□□□ 1.33
CHL1O00533 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.34■■□□□ 1.33
CHL1O00533 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC23.34■■□□□ 1.33
CHL1O00533 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CHL1O00533 AL138831.2-201ENST00000606564 490 ntBASIC23.34■■□□□ 1.33
CHL1O00533 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CHL1O00533 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC23.34■■□□□ 1.33
CHL1O00533 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHL1O00533 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.34■■□□□ 1.33
CHL1O00533 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHL1O00533 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHL1O00533 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHL1O00533 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHL1O00533 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHL1O00533 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC23.33■■□□□ 1.33
CHL1O00533 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.33■■□□□ 1.33
CHL1O00533 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.33■■□□□ 1.33
CHL1O00533 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHL1O00533 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
CHL1O00533 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHL1O00533 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.33■■□□□ 1.33
CHL1O00533 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.33■■□□□ 1.33
CHL1O00533 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHL1O00533 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHL1O00533 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHL1O00533 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHL1O00533 FICD-205ENST00000552758 603 ntTSL 2 BASIC23.33■■□□□ 1.33
CHL1O00533 AC099336.1-202ENST00000602961 463 ntBASIC23.33■■□□□ 1.33
CHL1O00533 AL732292.2-201ENST00000609649 430 ntBASIC23.33■■□□□ 1.33
CHL1O00533 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CHL1O00533 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
CHL1O00533 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC23.33■■□□□ 1.33
CHL1O00533 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
CHL1O00533 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC23.33■■□□□ 1.32
CHL1O00533 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
CHL1O00533 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
CHL1O00533 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.33■■□□□ 1.32
CHL1O00533 AC125634.1-201ENST00000438758 1403 ntBASIC23.33■■□□□ 1.32
CHL1O00533 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC23.33■■□□□ 1.32
CHL1O00533 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CHL1O00533 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CHL1O00533 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CHL1O00533 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CHL1O00533 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC23.32■■□□□ 1.32
CHL1O00533 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms