Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 AC009102.3-201ENST00000623118 1491 ntBASIC12.85□□□□□ -0.35
LINC01546A6NGU7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 AC022188.1-201ENST00000620960 1664 ntBASIC12.85□□□□□ -0.35
LINC01546A6NGU7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC01546A6NGU7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 AC034236.2-201ENST00000606662 1610 ntBASIC12.84□□□□□ -0.35
LINC01546A6NGU7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 AL163051.1-201ENST00000569214 1512 ntBASIC12.84□□□□□ -0.35
LINC01546A6NGU7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 RALB-208ENST00000631312 311 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms