Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
CDC42BPBQ9Y5S2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
CDC42BPBQ9Y5S2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC27.45■■□□□ 1.99
CDC42BPBQ9Y5S2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC27.45■■□□□ 1.99
CDC42BPBQ9Y5S2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC27.45■■□□□ 1.99
CDC42BPBQ9Y5S2 DNAJB3-201ENST00000446806 729 ntBASIC27.45■■□□□ 1.99
CDC42BPBQ9Y5S2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
CDC42BPBQ9Y5S2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.99
CDC42BPBQ9Y5S2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC27.45■■□□□ 1.99
CDC42BPBQ9Y5S2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CDC42BPBQ9Y5S2 AFG3L1P-217ENST00000557444 2447 ntBASIC27.45■■□□□ 1.98
CDC42BPBQ9Y5S2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CDC42BPBQ9Y5S2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CDC42BPBQ9Y5S2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CDC42BPBQ9Y5S2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CDC42BPBQ9Y5S2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 AC027796.2-201ENST00000575326 344 ntBASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
CDC42BPBQ9Y5S2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 AP006288.1-201ENST00000446065 395 ntBASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 AC134684.3-201ENST00000641758 218 ntBASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 ANO7L1-203ENST00000602586 1720 ntBASIC27.43■■□□□ 1.98
CDC42BPBQ9Y5S2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 BX005266.1-201ENST00000473402 457 ntBASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 AC112482.1-201ENST00000492080 688 ntBASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 AD001527.2-201ENST00000622994 785 ntBASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
CDC42BPBQ9Y5S2 AC096633.1-201ENST00000422446 749 ntBASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 AC108751.1-201ENST00000490852 363 ntBASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 RPS8P6-201ENST00000426177 609 ntBASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
CDC42BPBQ9Y5S2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 AC023274.1-201ENST00000418278 595 ntBASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms