Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 AC091305.1-201ENST00000479476 895 ntBASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 AL162412.1-201ENST00000567129 965 ntBASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 TERF1P2-201ENST00000583350 1212 ntBASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 AC016405.3-201ENST00000607710 860 ntBASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 AC022211.2-201ENST00000585075 2527 ntBASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
CHTOPQ9Y3Y2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 EDA-201ENST00000338901 1233 ntBASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHTOPQ9Y3Y2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 AC093677.2-201ENST00000600169 1863 ntBASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 LINC02228-203ENST00000641970 1355 ntBASIC13.1□□□□□ -0.31
CHTOPQ9Y3Y2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms