Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 AC117947.1-201ENST00000427448 529 ntBASIC17.21■□□□□ 0.35
RNF6Q9Y252 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 AC091390.4-202ENST00000476426 537 ntBASIC17.21■□□□□ 0.35
RNF6Q9Y252 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF6Q9Y252 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF6Q9Y252 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RNF6Q9Y252 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RNF6Q9Y252 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF6Q9Y252 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF6Q9Y252 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF6Q9Y252 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF6Q9Y252 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF6Q9Y252 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF6Q9Y252 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF6Q9Y252 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 SLC25A1P2-201ENST00000430693 912 ntBASIC17.2■□□□□ 0.34
RNF6Q9Y252 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 AC063952.2-201ENST00000498792 1227 ntBASIC17.2■□□□□ 0.34
RNF6Q9Y252 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF6Q9Y252 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF6Q9Y252 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF6Q9Y252 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF6Q9Y252 LINC00896-202ENST00000609602 2128 ntBASIC17.2■□□□□ 0.34
RNF6Q9Y252 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF6Q9Y252 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF6Q9Y252 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF6Q9Y252 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF6Q9Y252 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF6Q9Y252 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 AC139887.4-201ENST00000607877 719 ntBASIC17.19■□□□□ 0.34
RNF6Q9Y252 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF6Q9Y252 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF6Q9Y252 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF6Q9Y252 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF6Q9Y252 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF6Q9Y252 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF6Q9Y252 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF6Q9Y252 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF6Q9Y252 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF6Q9Y252 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms