Protein–RNA interactions for Protein: Q9UPT9

USP22, Ubiquitin carboxyl-terminal hydrolase 22, humanhuman

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP22Q9UPT9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP22Q9UPT9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP22Q9UPT9 B3GAT3P1-201ENST00000471720 806 ntBASIC17.25■□□□□ 0.35
USP22Q9UPT9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.25■□□□□ 0.35
USP22Q9UPT9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.25■□□□□ 0.35
USP22Q9UPT9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.25■□□□□ 0.35
USP22Q9UPT9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.25■□□□□ 0.35
USP22Q9UPT9 AL031985.4-201ENST00000642138 673 ntBASIC17.25■□□□□ 0.35
USP22Q9UPT9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
USP22Q9UPT9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP22Q9UPT9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP22Q9UPT9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.25■□□□□ 0.35
USP22Q9UPT9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP22Q9UPT9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP22Q9UPT9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP22Q9UPT9 AC084018.2-201ENST00000613093 2607 ntBASIC17.25■□□□□ 0.35
USP22Q9UPT9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP22Q9UPT9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.25■□□□□ 0.35
USP22Q9UPT9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP22Q9UPT9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.24■□□□□ 0.35
USP22Q9UPT9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP22Q9UPT9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP22Q9UPT9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.24■□□□□ 0.35
USP22Q9UPT9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
USP22Q9UPT9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP22Q9UPT9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.24■□□□□ 0.35
USP22Q9UPT9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP22Q9UPT9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
USP22Q9UPT9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP22Q9UPT9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP22Q9UPT9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP22Q9UPT9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP22Q9UPT9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP22Q9UPT9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
USP22Q9UPT9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.24■□□□□ 0.35
USP22Q9UPT9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.24■□□□□ 0.35
USP22Q9UPT9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP22Q9UPT9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USP22Q9UPT9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.23■□□□□ 0.35
USP22Q9UPT9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.23■□□□□ 0.35
USP22Q9UPT9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.23■□□□□ 0.35
USP22Q9UPT9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.23■□□□□ 0.35
USP22Q9UPT9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.23■□□□□ 0.35
USP22Q9UPT9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.23■□□□□ 0.35
USP22Q9UPT9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.23■□□□□ 0.35
USP22Q9UPT9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.23■□□□□ 0.35
USP22Q9UPT9 MIR6786-201ENST00000616843 113 ntBASIC17.23■□□□□ 0.35
USP22Q9UPT9 AC138932.1-201ENST00000534164 6830 ntBASIC17.23■□□□□ 0.35
USP22Q9UPT9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.23■□□□□ 0.35
USP22Q9UPT9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP22Q9UPT9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.23■□□□□ 0.35
USP22Q9UPT9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
USP22Q9UPT9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
USP22Q9UPT9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.22■□□□□ 0.35
USP22Q9UPT9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 PRORSD1P-201ENST00000295112 541 ntBASIC17.22■□□□□ 0.35
USP22Q9UPT9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.22■□□□□ 0.35
USP22Q9UPT9 AP000593.1-201ENST00000393668 712 ntBASIC17.22■□□□□ 0.35
USP22Q9UPT9 MCCD1P1-208ENST00000445732 328 ntBASIC17.22■□□□□ 0.35
USP22Q9UPT9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 C1QBPP2-201ENST00000528754 825 ntBASIC17.22■□□□□ 0.35
USP22Q9UPT9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.22■□□□□ 0.35
USP22Q9UPT9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.22■□□□□ 0.35
USP22Q9UPT9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
USP22Q9UPT9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.22■□□□□ 0.35
USP22Q9UPT9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
USP22Q9UPT9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.22■□□□□ 0.35
USP22Q9UPT9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
USP22Q9UPT9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP22Q9UPT9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms