Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN1Q9UMX0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 NUS1P1-201ENST00000446295 882 ntBASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 AC104819.1-201ENST00000504587 486 ntBASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 KRT126P-201ENST00000549467 1181 ntBASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 PRELID1P1-202ENST00000567272 903 ntBASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 AL353801.3-201ENST00000609898 542 ntBASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 AC012313.10-201ENST00000623509 926 ntBASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN1Q9UMX0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.52■□□□□ 0.71
UBQLN1Q9UMX0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UBQLN1Q9UMX0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
UBQLN1Q9UMX0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UBQLN1Q9UMX0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.52■□□□□ 0.71
UBQLN1Q9UMX0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.52■□□□□ 0.71
UBQLN1Q9UMX0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 KRT18P65-201ENST00000439811 1286 ntBASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 AC068472.1-201ENST00000474589 881 ntBASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.51■□□□□ 0.71
UBQLN1Q9UMX0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 AL845331.1-201ENST00000424978 1190 ntBASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 KRT17P6-201ENST00000453795 1220 ntBASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.5■□□□□ 0.71
UBQLN1Q9UMX0 AC074051.2-201ENST00000565115 352 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms