Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 VENTXP7-201ENST00000475503 772 ntBASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 AC074051.2-201ENST00000565115 352 ntBASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CLCF1Q9UBD9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 AC005082.1-201ENST00000413042 2259 ntBASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 KRT17P6-201ENST00000453795 1220 ntBASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 AP005901.3-202ENST00000581653 237 ntBASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 AL353801.3-201ENST00000609898 542 ntBASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 LINC00167-201ENST00000530583 1419 ntBASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCF1Q9UBD9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 TSPY19P-201ENST00000418461 509 ntBASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 TSPY12P-201ENST00000421279 868 ntBASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 IGHV3-47-201ENST00000425060 335 ntBASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 TSPY18P-201ENST00000441642 509 ntBASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 AC111152.3-201ENST00000569699 673 ntBASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLCF1Q9UBD9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 AC091607.1-201ENST00000490318 1060 ntBASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.17■□□□□ 0.18
CLCF1Q9UBD9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms